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Oxford Nanopore dataset for molecular macrobenthos biodiversity monitoring comparing Oxford Nanopore and Illumina based metabarcoding and metagenomics
Citeerbaar als data publicatie
Doorenspleet, K.; Mailli, A.A.; van der Hoorn, B.; Beentjes, K.; De Backer, A.; Derycke, S.; Murk, A.; Reiss, H.; Nijland, R.; Wageningen University and Research; Nord University; Naturalis Biodiversity Center; ILVO Marine Research; (2024): Oxford Nanopore dataset for molecular macrobenthos biodiversity monitoring comparing Oxford Nanopore and Illumina based metabarcoding and metagenomics. Marine Data Archive. https://doi.org/10.14284/683
Contact:
Doorenspleet, Karlijn ;
Mailli, Amalia Beschikbaarheid:
 Deze dataset valt onder een Creative Commons Naamsvermelding 4.0 Internationaal-licentie.Beschrijving
The Oxford Nanopore metabarcoding dataset for the manuscript: Advancing molecular macrobenthos biodiversity monitoring: a comparison between Oxford Nanopore and Illumina based metabarcoding and metagenomics. meer
For this manuscript 3 datasets are available that all analyze 12 Bulk samples of macrobenthos from the Belgian North Sea. These samples were used: 1. For NovaSeq shotgun metagenomics 2. For Nanopore metabarc oding of amplicons from a COI region 3. For Illumina MiSeq metabarcoding of amplicons from the exact same COI region. This is the data for from the Oxford Nanopore run. Scope Thema's: Biologie > Benthos > Macrobenthos, Biologie > Ecologie - biodiversiteit Kernwoorden: Marien/Kust, , DNA, Metabarcoding, Metagenomica, ANE, België Geografische spreiding ANE, België [Marine Regions] Spreiding in de tijd
Oktober 2017 Parameters
Aantallen (geteld) Soorten Species richness Bijdrage door
Wageningen University and Research Centre; Marine Animal Ecology, meer, data creator
Nord University; Faculty of Biosciences and Aquaculture, meer, data creator
Naturalis Biodiversity Center (NBC), meer, data creator
Instituut voor Landbouw-, Visserij- en Voedingsonderzoek (ILVO), meer, data creator
Gerelateerde datasets
Andere relaties: Illumina MiSeq dataset for molecular macrobenthos biodiversity monitoring comparing Oxford Nanopore and Illumina based metabarcoding and metagenomics, meer Illumina Novaseq dataset for molecular macrobenthos biodiversity monitoring comparing Oxford Nanopore and Illumina based metabarcoding and metagenomics, meer Dataset status: Afgelopen
Data type: Data
Data oorsprong: Onderzoek: labo-experiment
Metadatarecord aangemaakt: 2024-09-26
Informatie laatst gewijzigd: 2024-09-26
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