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ARMS-MBON data on long-term monitoring of hard-bottom communities: ITS results from 2020-2022
Citatie
Pagnier J.; Allcock L.; Cancio I.; Chatzinikolaou E.; Chatzigeorgiou G.; Chrismas NAM.; Costantini F.; Dailianis T.; Deneudt K.; Diaz de Cerio, O.; Digenis M.; Exter K.; GerovasileiouV.; , González Fernández J.; Kauppi L.; Keklikoglou K.; Kristoffersen JB.; Lagaisse R.; Mavrič B.; Mortelmans J.; Paredes E.; Pavloudi C.; Piazza A.; Power AM.; Ramšak A.; Santi I.; Solbakken J.; Stavroulaki M.; Stæhr PAU.; Tajadura J.; Souza Troncoso J.; Vasileiadou K.; Vernadou E.; Obst M. (2025): ARMS-MBON data on long-term monitoring of hard-bottom communities: ITS results from 2020-2022. https://marineinfo.org/doc/dataset/8921
Contact:
Obst, Matthias ;
Ook beschikbaar via: Beschikbaarheid:
 Deze dataset valt onder een Creative Commons Naamsvermelding 4.0 Internationaal-licentie.Beschrijving
ARMS-MBON is a network of more than 25 partners who deploy Autonomous Reef Monitoring Structures (ARMS) settlement units in the vicinity of marine stations and Long-term Ecological Research sites in European coastal waters and Ant/arctica. After a few months the units are brought up, and visual, photographic, and genetic assessments are made of the lifeforms that settled on them. The collected data are published (see the related datasets and GitHub links listed in this record) and the omics data analysed. In this record we include the outputs of our analysis of the ITS data from the 2020-2022 campaign. The analysis used the PEMA bioinformatics software, and the resulting taxonomics inventory has been turned into DwC format. In addition, all the PEMA inputs and outputs can be found on the ARMS-MBON GitHub site (see links in this record), and the subset of the sampling data to which these 18S results are linked can also be found on the ARMS-MBON GitHub site. Afstamming
Prior to publication data undergo quality control checked which are described in https://github.com/EMODnet/EMODnetBiocheck?tab=readme-ov-file#understanding-the-output Scope Thema's: Biologie > Benthos Kernwoorden: ASSEMBLEPlus Joint Research Activity 1 · Benthic regions · Bentische gemeenschappen · Biodiversiteit · Biogeografische gebieden · Biota · DNA barcoding · Geen beperkingen op publieke toegang · Genome analysis · Geowetenschappelijke informatie · Habitats en biotopen · Invasive species · Langetermijn records · Metadata niet conform · Metadata niet gecontroleerd · Milieu · Oceanen · Soortendiversiteit · Species diversity · WGS84 (EPSG:4326) · XYZ ASCII · Zeegebieden · 13E1 · 17G2 · 28F0 · 42F9 · 43G2 · 44G1 · Abra de Bilbao · Belgian part of the North Sea · Crete Island · Kilkieran Bay and Islands · Kosterfjorden-Väderöfjorden · Plymouth Sound · Tammisaaren Ja Hangon Saariston Ja Pohjanpitäjänlahden Merensuojelualue · The Sound · Acremonium Link, 1809 · Agaricaceae Chevall., 1826 · Agaricales · Agaricomycetes · Agaricostilbales · Alternaria Nees ex Wallroth, 1816 · Amandinea punctata (Hoffm.) Coppins & Scheid., 1993 · Apiosporaceae K.D. Hyde, J. Fröhl., Joanne E. Taylor & M.E. Barr, 1998 · Ascomycota · Aspergillus P. Micheli, 1729 · Basidiomycota · Biatriospora K.D. Hyde & Borse, 1986 · Bionectria Speg., 1918 · Bionectria ochroleuca (Schwein.) Schroers & Samuels, 1997 · Bionectriaceae Samuels & Rossman, 1999 · Blumeria Golovin ex Speer, 1975 · Bulleribasidiaceae Xin Zhan Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015 · Cadophora malorum (Kidd & Beaumont) W. Gams, 2000 · Candelariaceae Hakul., 1954 · Candelariella aurella (Hoffm.) Zahlbr., 1928 · Capnodiales · Cercophora Fuckel, 1870 · Chaetosphaeriales · Chaetothyriales · Chaunopycnis W. Gams, 1979 · Chytridiomycota · Cladosporium Link, 1816 · Cladosporium herbarum (Pers.:Fr.) Link, 1821 · Cladosporium sphaerospermum Penz., 1882 · Clitocybe (Fr.) Staude, 1857 · Cnidaria · Conioscyphales · Cryptococcus Vuill., 1901 · Cryptococcus victoriae M.J. Montes, Belloch, Galiana, M.D. García, C. Andrés, S. Ferrer, Torr.-Rodr. & J. Guinea, 1999 · Cystobasidiales · Cystobasidiomycetes · Daldinia Ces. & De Not., 1863 · Debaryomyces hansenii (Zopf) Lodder & Kreger-van Rij, 1984 · Devriesia Seifert & N.L. Nick., 2004 · Didymella Saccardo, 1880 · Didymosphaeriaceae Munk, 1953 · Dipodascaceae Engl. & E. Gilg, 1924 · Dothideomycetes · Elasticomyces Zucconi & Selbmann, 2008 · Endomycetales · Entolomataceae Kotl. & Pouzar, 1972 · Epicoccum nigrum Link, 1816 · Eupenicillium F. Ludw., 1892 · Eurotiales · Eurotiomycetes · Exophiala J.W. Carmich., 1966 · Filobasidium L.S. Olive, 1968 · Floricolaceae Thambugala, Kaz. Tanaka & K.D. Hyde, 2015 · Fungi · Fusarium Link, 1809 · Gibberella zeae (Schwein.) Petch, 1936 · Helotiaceae Rehm, 1892 · Helotiales · Hemiascomycetes · Herpotrichiellaceae Munk, 1953 · Hyaloscyphaceae Nannf., 1932 · Hypocrea Fr., 1825 · Hypocreaceae De Not., 1844 · Hypocreales · Knufia L.J. Hutchison & Unter., 1996 · Lasiosphaeriaceae Nannf., 1932 · Lecanorales · Leotiomycetes · Leptosphaeria Cesati & de Notaris, 1863 · Leucosporidium Fell, Statzell, I.L. Hunter & Phaff, 1970 · Lulworthiaceae Kohlm., Spatafora & Volkm.-Kohlm., 2000 · Lycoperdaceae F. Berchtold & J. Presl, 1820 · Lycoperdon P. Micheli, 1729 · Microbotryomycetes · Mortierella Coem., 1863 · Mortierella parvispora Linnem., 1941 · Mortierellaceae A. Fisch., 1892 · Mortierellales · Mrakia Y. Yamada & Komag., 1987 · Nectria pseudotrichia Berk. & M.A. Curtis, 1854 · Nectriaceae Tul. & C. Tul., 1865 · Oidiodendron Robak, 1932 · Olpidiales · Onygenales · Paraconiothyrium Verkley, 2004 · Paraphaeosphaeria O.E. Erikss., 1967 · Paxillus H. Adams & A. Adams, 1851 · Petriellidium ellipsoideum Arx & Fassat, 1973 · Phaeosphaeriaceae M.E. Barr, 1979 · Phallus Junius ex L., 1753 · Plectosporium M.E. Palm, W. Gams & Nirenberg, 1995 · Pleosporales · Psathyrellaceae Locq., 1972 · Ramalina Ach., 1809 · Rhodosporidium infirmominiatum Fell, I.L. Hunter & Tallman, 1973 · Rhodotorula mucilaginosa (A. Jörg.) F.C. Harrison, 1928 · Rozellida · Russulales · Sclerotiniaceae Whetzel, 1945 · Sordariales · Sordariomycetes · Sporidiales · Sporidiobolaceae Kobayasi, 1961 · Sterigmatomyces halophilus Fell, 1966 · Talaromyces C.R. Benj., 1955 · Taphrinales · Teloschistaceae Zahlbr., 1898 · Teratosphaeriaceae Crous & U. Braun, 2007 · Thyridariaceae Q. Tian & K.D. Hyde, 2013 · Tremella Linnaeus, 1753 · Tremellales · Tremellomycetes · Trichocomaceae E. Fisch., 1897 · Trichosporon diddensiae Phaff, Mrak & O.B. Williams, 1952 · Truncatella Risso, 1826 · Venturia Sacc., 1882 · Vermiconia Egidi & Onofri, 2014 Geografische spreiding 13E1 [Marine Regions] 17G2 [Marine Regions] 28F0 [Marine Regions] 42F9 [Marine Regions] 43G2 [Marine Regions] 44G1 [Marine Regions] Abra de Bilbao [Marine Regions] Belgian part of the North Sea [Marine Regions] Crete Island [Marine Regions] Kilkieran Bay and Islands [Marine Regions] Kosterfjorden-Väderöfjorden [Marine Regions] Plymouth Sound [Marine Regions] Tammisaaren Ja Hangon Saariston Ja Pohjanpitäjänlahden Merensuojelualue [Marine Regions] The Sound [Marine Regions] Spreiding in de tijd
31 Januari 2020 - 3 November 2020 Taxonomic coverage
Acremonium Link, 1809 [WoRMS]
Agaricaceae Chevall., 1826 [WoRMS]
Agaricales [WoRMS]
Agaricomycetes [WoRMS]
Agaricostilbales [WoRMS]
Alternaria Nees ex Wallroth, 1816 [WoRMS]
Amandinea punctata (Hoffm.) Coppins & Scheid., 1993 [WoRMS]
Apiosporaceae K.D. Hyde, J. Fröhl., Joanne E. Taylor & M.E. Barr, 1998 [WoRMS]
Ascomycota [WoRMS]
Aspergillus P. Micheli, 1729 [WoRMS]
Basidiomycota [WoRMS]
Biatriospora K.D. Hyde & Borse, 1986 [WoRMS]
Bionectria Speg., 1918 [WoRMS]
Bionectria ochroleuca (Schwein.) Schroers & Samuels, 1997 [WoRMS]
Bionectriaceae Samuels & Rossman, 1999 [WoRMS]
Blumeria Golovin ex Speer, 1975 [WoRMS]
Bulleribasidiaceae Xin Zhan Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015 [WoRMS]
Cadophora malorum (Kidd & Beaumont) W. Gams, 2000 [WoRMS]
Candelariaceae Hakul., 1954 [WoRMS]
Candelariella aurella (Hoffm.) Zahlbr., 1928 [WoRMS]
Capnodiales [WoRMS]
Cercophora Fuckel, 1870 [WoRMS]
Chaetosphaeriales [WoRMS]
Chaetothyriales [WoRMS]
Chaunopycnis W. Gams, 1979 [WoRMS]
Chytridiomycota [WoRMS]
Cladosporium Link, 1816 [WoRMS]
Cladosporium herbarum (Pers.:Fr.) Link, 1821 [WoRMS]
Cladosporium sphaerospermum Penz., 1882 [WoRMS]
Clitocybe (Fr.) Staude, 1857 [WoRMS]
Cnidaria [WoRMS]
Conioscyphales [WoRMS]
Cryptococcus Vuill., 1901 [WoRMS]
Cryptococcus victoriae M.J. Montes, Belloch, Galiana, M.D. García, C. Andrés, S. Ferrer, Torr.-Rodr. & J. Guinea, 1999 [WoRMS]
Cystobasidiales [WoRMS]
Cystobasidiomycetes [WoRMS]
Daldinia Ces. & De Not., 1863 [WoRMS]
Debaryomyces hansenii (Zopf) Lodder & Kreger-van Rij, 1984 [WoRMS]
Devriesia Seifert & N.L. Nick., 2004 [WoRMS]
Didymella Saccardo, 1880 [WoRMS]
Didymosphaeriaceae Munk, 1953 [WoRMS]
Dipodascaceae Engl. & E. Gilg, 1924 [WoRMS]
Dothideomycetes [WoRMS]
Elasticomyces Zucconi & Selbmann, 2008 [WoRMS]
Endomycetales [WoRMS]
Entolomataceae Kotl. & Pouzar, 1972 [WoRMS]
Epicoccum nigrum Link, 1816 [WoRMS]
Eupenicillium F. Ludw., 1892 [WoRMS]
Eurotiales [WoRMS]
Eurotiomycetes [WoRMS]
Exophiala J.W. Carmich., 1966 [WoRMS]
Filobasidium L.S. Olive, 1968 [WoRMS]
Floricolaceae Thambugala, Kaz. Tanaka & K.D. Hyde, 2015 [WoRMS]
Fungi [WoRMS]
Fusarium Link, 1809 [WoRMS]
Gibberella zeae (Schwein.) Petch, 1936 [WoRMS]
Helotiaceae Rehm, 1892 [WoRMS]
Helotiales [WoRMS]
Hemiascomycetes [WoRMS]
Herpotrichiellaceae Munk, 1953 [WoRMS]
Hyaloscyphaceae Nannf., 1932 [WoRMS]
Hypocrea Fr., 1825 [WoRMS]
Hypocreaceae De Not., 1844 [WoRMS]
Hypocreales [WoRMS]
Knufia L.J. Hutchison & Unter., 1996 [WoRMS]
Lasiosphaeriaceae Nannf., 1932 [WoRMS]
Lecanorales [WoRMS]
Leotiomycetes [WoRMS]
Leptosphaeria Cesati & de Notaris, 1863 [WoRMS]
Leucosporidium Fell, Statzell, I.L. Hunter & Phaff, 1970 [WoRMS]
Lulworthiaceae Kohlm., Spatafora & Volkm.-Kohlm., 2000 [WoRMS]
Lycoperdaceae F. Berchtold & J. Presl, 1820 [WoRMS]
Lycoperdon P. Micheli, 1729 [WoRMS]
Microbotryomycetes [WoRMS]
Mortierella Coem., 1863 [WoRMS]
Mortierella parvispora Linnem., 1941 [WoRMS]
Mortierellaceae A. Fisch., 1892 [WoRMS]
Mortierellales [WoRMS]
Mrakia Y. Yamada & Komag., 1987 [WoRMS]
Nectria pseudotrichia Berk. & M.A. Curtis, 1854 [WoRMS]
Nectriaceae Tul. & C. Tul., 1865 [WoRMS]
Oidiodendron Robak, 1932 [WoRMS]
Olpidiales [WoRMS]
Onygenales [WoRMS]
Paraconiothyrium Verkley, 2004 [WoRMS]
Paraphaeosphaeria O.E. Erikss., 1967 [WoRMS]
Paxillus H. Adams & A. Adams, 1851 [WoRMS]
Petriellidium ellipsoideum Arx & Fassat, 1973 [WoRMS]
Phaeosphaeriaceae M.E. Barr, 1979 [WoRMS]
Phallus Junius ex L., 1753 [WoRMS]
Plectosporium M.E. Palm, W. Gams & Nirenberg, 1995 [WoRMS]
Pleosporales [WoRMS]
Psathyrellaceae Locq., 1972 [WoRMS]
Ramalina Ach., 1809 [WoRMS]
Rhodosporidium infirmominiatum Fell, I.L. Hunter & Tallman, 1973 [WoRMS]
Rhodotorula mucilaginosa (A. Jörg.) F.C. Harrison, 1928 [WoRMS]
Rozellida [WoRMS]
Russulales [WoRMS]
Sclerotiniaceae Whetzel, 1945 [WoRMS]
Sordariales [WoRMS]
Sordariomycetes [WoRMS]
Sporidiales [WoRMS]
Sporidiobolaceae Kobayasi, 1961 [WoRMS]
Sterigmatomyces halophilus Fell, 1966 [WoRMS]
Talaromyces C.R. Benj., 1955 [WoRMS]
Taphrinales [WoRMS]
Teloschistaceae Zahlbr., 1898 [WoRMS]
Teratosphaeriaceae Crous & U. Braun, 2007 [WoRMS]
Thyridariaceae Q. Tian & K.D. Hyde, 2013 [WoRMS]
Tremella Linnaeus, 1753 [WoRMS]
Tremellales [WoRMS]
Tremellomycetes [WoRMS]
Trichocomaceae E. Fisch., 1897 [WoRMS]
Trichosporon diddensiae Phaff, Mrak & O.B. Williams, 1952 [WoRMS]
Truncatella Risso, 1826 [WoRMS]
Venturia Sacc., 1882 [WoRMS]
Vermiconia Egidi & Onofri, 2014 [WoRMS]
Bijdrage door
University of Gothenburg; Faculty of Science; Department of Marine Sciences, meer, data creator, data eigenaar
Vlaams Instituut voor de Zee (VLIZ), meer, data creator, data verzamelaar
Hellenic Centre for Marine Research; Institute of Marine Biology, Biotechnology and Aquaculture (IMBCC), meer, data beheerder, data creator, data verzamelaar
European Marine Biological Research Centre (EMBRC-ERIC), meer, data creator
National Institute of Biology; Marine Biological Station Piran (MBS), meer, data verzamelaar
University of Helsinki; Tvärminne Zoological Station (TZS), meer, data verzamelaar
University of Aarhus; Faculty of Technical Sciences; Department of Ecoscience, meer, data verzamelaar
University of Bologna; Department of Biological, Geological and Environmental Sciences (BIGEA), meer, data verzamelaar
Marine Biological Association of the UK (MBA), meer, data verzamelaar
University of the Basque country; Plentzia Marine Station (PiE-UPV/EHU), meer, data verzamelaar
University of Vigo; Ecology and Animal Biology Department; Facultad de Ciencias do Mar; Grupo de Investigación en Ecología Costera (EcoCost), meer, data verzamelaar
Gerelateerde datasets
Project
ASSEMBLE+: Association of European Marine Biological Laboratories Expanded, meer
Financiering Horizon
Subsidieovereenkomst ID 730984
Publicatie
Gebaseerd op deze dataset
Obst, M. et al. (2020). A Marine Biodiversity Observation Network for genetic monitoring of hard-bottom communities (ARMS-MBON). Front. Mar. Sci. 7: 572680. https://dx.doi.org/10.3389/fmars.2020.572680, meer
URL's
Dataset informatie: Other: Dataset status: Afgelopen
Data type: Data
Data oorsprong: Monitoring: veldonderzoek
Datum van vrijgave: 2025-11-25
Metadatarecord aangemaakt: 2025-09-16
Informatie laatst gewijzigd: 2026-04-02
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