Publicaties | Instituten | Personen | Datasets | Projecten | Kaarten | ||||
Nanopore based eDNA metabarcoding of marine vertebrates in the North Sea
Citatie
Doorenspleet, K.; Jansen, L.; Oosterbroek, S.; Kamermans, P.; Wurz, E.; Murk, A.; Nijland, R.; Marine Animal Ecology; Wageningen Marine Research; Wageningen University and Research Centre: The Netherlands; (2024): Nanopore based eDNA metabarcoding of marine vertebrates in the North Sea. https://marineinfo.org/id/dataset/8601
Contact:
Nijland, Reindert Beschikbaarheid:
![]() Beschrijving
This data is the result of DNA-based water sampling of eDNA in different locations in the North Sea. meer
Molecular Data generation of marine biodiversity data plays a central role in monitoring and better understanding of North Sea marine ecosystems. By applying DNA-based techniques, this study specifically aims to present a metabarcoding pipeline for Nanopore sequencing and compare a newly designed 2kb primer with commonly used MiFish pimer. eDNA samples were taken in The ray reef aquarium in Dolfinarium , The brokum reef ground in the North sea, at sany bottom, Gmini windpark and around 3 shipwrecks in the North Sea and analysed through metabarcoding with nanopore sequencing and results were compared with morphology and commonly used MiFish primer in order to demonstrate the value of applying this technique. Scope Thema's: Biologie > Invertebraten, Biologie > Vis Kernwoorden: Marien/Kust, , Elasmobranchs, Fish, Metabarcoding, MinION, ANE, Noordzee Geografische spreiding ANE, Noordzee [Marine Regions] Spreiding in de tijd
1 Juli 2019 - 31 Juli 2020 Diepte: Diving computer pH-zuurtegraad: CTD CTD type: SBE-19 (www.seabird.com); depth profiles of temperature and salinity equipped with a OBS probe for relative turbidity measurements Saliniteit: CTD CTD type: SBE-19 (www.seabird.com); depth profiles of temperature and salinity equipped with a OBS probe for relative turbidity measurements Temperatuur: CTD CTD type: SBE-19 (www.seabird.com); depth profiles of temperature and salinity equipped with a OBS probe for relative turbidity measurements Bijdrage door
Dataset status: Afgelopen
Data type: Data
Data oorsprong: Onderzoek: veldexperiment
Metadatarecord aangemaakt: 2024-06-17
Informatie laatst gewijzigd: 2024-06-27
|
Ben je op zoek naar personen of publicaties?
Klik dan door naar onze databank IMIS.