IMIS

Prof. Dr Middelburg, Jack
ORCID ResearcherID Institute home page

Institute
Previous institute
Publications (303)
Projects (16)
Datasets (7)

Universiteit Utrecht; Faculteit Geowetenschappen, more

Institutional address:
Budapestlaan 4
3584 CD Utrecht
Netherlands

Koninklijk Nederlands Instituut voor Onderzoek der Zee; Estuarine and Delta Systems (EDS), more

Function: Head of department

Biogas transfer in Estuaries, more
Biogeochemical processes in estuarine systems, more
Biogeochemische cycli in open oceanen, kustzeeën en estuaria, more
Carbon and nitrogen cycling in the Scheldt estuary: towards an integrated view and an identification of the major players, more
Carbon and Nitrogen cycling in the Westerschelde, more
COastal SAnds as Biocatalytical Filters, more
De functionele rol van het mariene macrobenthos in het metabolisme van de zeebodem., more
Food, oxygen and bioturbation: an experimental study of meiofauna community structure, more
Functional role of nematodes and foraminifera in benthic metabolism, more
Koolstof en stikstof cycli in de Westerschelde : het ontwikkelen van een geïntegreerde visie en de identificatie van de belangrijkste organismen in die cycli, more
Nutrients Cycling and the Trophic Status of Coastal Ecosystems, more
The balance between heterotrophic and autotophic processes in the Scheldt estuary: consequences for the carbon and nitrogen cycles, more
The development of early diagenetic models, more
Tidal freshwater marshes as processors and sinks of nitrogen in estuaries: a whole ecosystem 15N-labeling study, more
Understanding benthic, pelagic and air-borne ecosystem interactions in shallow coastal seas, more
Zoetwaterschorren als "sinks" voor stikstof: dynamiek van het benthische compartiment en het onderzoek naar hun rol in estuariene stikstofretentie, more

Andersson M., Middelburg J. 2003: Nitrogen cycling in the Westerschelde Estuary in 2003. Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1760, more
Middelburg J. 1997: Publication data from Jack Middelburg for BIOGEST (methane data). Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1815, more
Middelburg J. 1998: Publication data from Jack Middelburg for BIOGEST (particulate del13C, del15N, POC, PON, DOC, N2O and nitrogen uptake data). Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1811, more
Middelburg J. 1999: Publication data from Jack Middelburg for BIOGEST (Nitrogen isotope tracing). Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1813, more
Middelburg J. 1999: Publication data from Jack Middelburg for BIOGEST (nitrogen uptake data). Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1816, more
Middelburg J., Herman P. 1991: Data set on pore-water composition and sediment-air fluxes in the Scheldt estuary at 9 stations with seasonal resolution. Intertidal sediments. Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1823, more
ALGBAC: Middelburg J., Soetaert K. 2000: 13C label transfer from algae to bacteria. Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1218, more

A1 Publications (214) [show]
van de Mortel, H.; Delaigue, L.; Humphreys, M.P.; Middelburg, J.J; Ossebaar, S.; Bakker, K.; Alexandre, J.P.T.; van Leeuwen-Tolboom, A.W.E.; Wolthers, M.; Sulpis, O. (2024). Laboratory observation of the buffering effect of aragonite dissolution at the seafloor. JGR: Biogeosciences 129(2): e2023JG007581. https://dx.doi.org/10.1029/2023jg007581, more Wang, C.; Qiu, Y.; Hao, Z.; Wang, J.; Zhang, C.; Middelburg, J.J.; Wang, Y.; Zou, X. (2024). Global patterns of organic carbon transfer and accumulation across the land–ocean continuum constrained by radiocarbon data. Nature Geoscience 17(8): 778-786. https://dx.doi.org/10.1038/s41561-024-01476-4, more Cramwinckel, M.J.; van der Ploeg, R.; van Helmond, N.A.G.M.; Waarlo, N.; Agnini, C.; Bijl, P.K.; van der Boon, A.; Brinkhuis, H.; Frieling, J.; Krijgsman, W.; Mather, T.A.; Middelburg, J.J.; Peterse, F.; Slomp, C.P.; Sluijs, A. (2023). Deoxygenation and organic carbon sequestration in the Tethyan realm associated with the middle Eocene climatic optimum. Geol. Soc. Am. Bull. 135(5-6): 1280-1296. https://dx.doi.org/10.1130/b36280.1, more van der Ploeg, R.; Cramwinckel, M.J.; Kocken, I.J.; Leutert, T.J.; Bohaty, S.M.; Fokkema, C.D.; Hull, P.M.; Meckler, A.N.; Middelburg, J.; Müller, I.A.; Penman, D.E.; Peterse, F; Reichart, G.-J.; Sexton, P.F.; Vahlenkamp, M.; De Vleeschouwer, D.; Wilson, P.A.; Ziegler, M.; Sluijs, A. (2023). North Atlantic surface ocean warming and salinization in response to middle Eocene greenhouse warming. Science Advances 9(4): eabq0110. https://dx.doi.org/10.1126/sciadv.abq0110, more Epstein, G.; Middelburg, J.J.; Hawkins, J.P.; Norris, C.R.; Roberts, C. M. (2022). The impact of mobile demersal fishing on carbon storage in seabed sediments. Glob. Chang. Biol. 28(9): 2875-2894. https://dx.doi.org/10.1111/gcb.16105, more Geerken, E.; de Nooijer, L.; Toyofuku, T.; Roepert, A.; Middelburg, J.J.; Kienhuis, M.V.M.; Nagai, Y.; Polerecky, L.; Reichart, G.-J. (2022). High precipitation rates characterize biomineralization in the benthic foraminifer Ammonia beccarii. Geochim. Cosmochim. Acta 318: 70-82. https://dx.doi.org/10.1016/j.gca.2021.11.026, more Geerken, E.; de Nooijer, L.J.; Toyofuku, T.; Roepert, A.; Middelburg, J.J.; Kienhuis, M.V.M.; Nagai, Y.; Polerecky, L.; Reichart, G.-J. (2022). High precipitation rates characterize biomineralization in the benthic foraminifer Ammonia beccarii. Geochim. Cosmochim. Acta 318: 70-82. https://dx.doi.org/10.1016/j.gca.2021.11.026, more Hanz, U.; Riekenberg, P.M.; de Kluijver, A.; van der Meer, M.T.J.; Middelburg, J.J.; de Goeij, J.M.; Bart, M.C.; Wurz, E.; Colaço, A.; Duineveld, G.C.A.; Reichart, G.-J.; Rapp, H.T.; Mienis, F. (2022). The important role of sponges in carbon and nitrogen cycling in a deep‐sea biological hotspot. Funct. Ecol. 36(9): 2188-2199. https://dx.doi.org/10.1111/1365-2435.14117, more Hülse, D.; Vervoort, P.; van de Velde, S.J.; Kanzaki, Y.; Boudreau, B.; Arndt, S.; Bottjer, D.J.; Hoogakker, B.; Kuderer, M.; Middelburg, J.J.; Volkenborn, N.; Turner, S.K.; Ridgwell, A. (2022). Assessing the impact of bioturbation on sedimentary isotopic records through numerical models. Earth-Sci. Rev. 234: 104213. https://dx.doi.org/10.1016/j.earscirev.2022.104213, more Sulpis, O.; Agrawal, P.; Wolthers, M.; Munhoven, G.; Walker, M.; Middelburg, J. (2022). Aragonite dissolution protects calcite at the seafloor. Nature Comm. 13(1): 1104. https://dx.doi.org/10.1038/s41467-022-28711-z, more Sulpis, O.; Humphreys, M.P.; Wilhelmus, M.M.; Carroll, D.; Berelson, W.M.; Menemenlis, D.; Middelburg, J.J.; Adkins, J.F. (2022). RADIv1: a non-steady-state early diagenetic model for ocean sediments in Julia and MATLAB/GNU Octave. Geosci. Model Dev. 15(5): 2105-2131. https://dx.doi.org/10.5194/gmd-15-2105-2022, more Bianchi, T.S.; Aller, R.C.; Atwood, T.B.; Brown, C.J.; Buatois, L.A.; Levin, L.A.; Levinton, J.S.; Middelburg, J.J.; Morrison, E.S.; Regnier, P.; Shields, M.R.; Snelgrove, P.V.R.; Sotka, E.E.; Stanley, R.R.E. (2021). What global biogeochemical consequences will marine animal-sediment interactions have during climate change? Elem. Sci. Anth. 9(1): 25. https://dx.doi.org/10.1525/elementa.2020.00180, more de Kluijver, A.; Bart, M.C.; van Oevelen, D.; de Goeij, J.M.; Leys, S.P.; Maier, S.R.; Maldonado, M.; Soetaert, K.; Verbiest, S.; Middelburg, J.J. (2021). An integrative model of carbon and nitrogen metabolism in a common deep-sea sponge (Geodia barretti). Front. Mar. Sci. 7: 596251. https://dx.doi.org/10.3389/fmars.2020.596251, more de Kluijver, A.; Nierop, K.G.J.; Morganti, T.M.; Bart, M.C.; Slaby, B.M.; Hanz, U.; de Goeij, J.M.; Mienis, F.; Middelburg, J.J. (2021). Bacterial precursors and unsaturated long-chain fatty acids are biomarkers of North-Atlantic deep-sea demosponges. PLoS One 16: e0241095. https://doi.org/10.1371/journal.pone.0241095, more Geerlings, N.M.J.; Geelhoed, J.S.; Vasquez-Cardenas, D.; Kienhuis, M.V.M.; Hidalgo-Martinez, S.; Boschker, H.T.S.; Middelburg, J.J.; Meysman, F.J.R.; Polerecky, L. (2021). Cell cycle, filament growth and synchronized cell division in multicellular cable bacteria. Front. Microbiol. 12: 620807. https://dx.doi.org/10.3389/fmicb.2021.620807, more Jacques, C.; Gkritzalis, T.; Tison, J.-L.; Hartley, T.; van der Veen, C.; Röckmann, T.; Middelburg, J.J.; Cattrijsse, A.; Egger, M.; Dehairs, F.; Sapart, C.J. (2021). Carbon and hydrogen isotope signatures of dissolved methane in the Scheldt Estuary. Est. Coast. 44(1): 137–146. https://dx.doi.org/10.1007/s12237-020-00768-3, more Riekenberg, P.M.; Camalich, J.; Svensson, E.; IJsseldijk, L.L.; Brasseur, S.M.; Witbaard, R.; Leopold, M.F.; Rebolledo, E.B.; Middelburg, J.J.; Van der Meer, M.T.J.; Sinninghe Damsté, J.S.; Schouten, S. (2021). Reconstructing the diet, trophic level and migration pattern of mysticete whales based on baleen isotopic composition. Royal Society Open Science 8(12): 210949. https://dx.doi.org/10.1098/rsos.210949, more Sulpis, O.; Jeansson, E.; Dinauer, A.; Lauvset, S.K.; Middelburg, J.J. (2021). Calcium carbonate dissolution patterns in the ocean. Nature Geoscience 14(6): 423-428. https://dx.doi.org/10.1038/s41561-021-00743-y, more Geerlings, N.M.J.; Karman, C.; Trashin, S.; As, K.S.; Kienhuis, M.V.M.; Hidalgo-Martinez, S.; Vasquez-Cardenas, D.; Boschker, H.T.S.; De Wael, K.; Middelburg, J.J.; Polerecky, L.; Meysman, F.J.R. (2020). Division of labor and growth during electrical cooperation in multicellular cable bacteria. Proc. Natl. Acad. Sci. U.S.A. 117(10): 5478-5485. https://dx.doi.org/10.1073/pnas.1916244117, more Grothe, A.; Andreetto; Reichart, G.-J.; Wolthers, M.; Van Baak; Vasiliev, I.; Stoica, M.; Sangiorgi, F.; Middelburg, J.J.; Davies, G.R.; Krijgsman, W. (2020). Paratethys pacing of the Messinian Salinity Crisis: Low salinity waters contributing to gypsum precipitation? Earth Planet. Sci. Lett. 532: 116029. https://dx.doi.org/10.1016/j.epsl.2019.116029, more Middelburg, J.J.; Soetaert, K.; Hagens, M. (2020). Ocean alkalinity, buffering and biogeochemical processes. Rev. Geophys. 58(3): e2019RG000681. https://doi.org/10.1029/2019rg000681, more Roepert, A.; Polerecky, L.; Geerken, E.; Reichart, G.-J.; Middelburg, J. (2020). Distribution of chlorine and fluorine in benthic foraminifera. Biogeosciences 17(18): 4727-4743. https://doi.org/10.5194/bg-17-4727-2020, more Tan, E.; Zou, W.; Zheng, Z.; Yan, X.; Du, M.; Hsu, T.-C.; Tian, L.; Middelburg, J.J.; Trull, W; Kao, S.-J. (2020). Warming stimulates sediment denitrification at the expense of anaerobic ammonium oxidation. Nat. Clim. Chang. 10(4): 349-355. https://dx.doi.org/10.1038/s41558-020-0723-2, more Cramwinckel, M.J.; van der Ploeg, R.; Bijl, P.K.; Peterse, F; Bohaty, S.M.; Röhl, U.; Schouten, S.; Middelburg, J.J.; Sluijs, A. (2019). Harmful algae and export production collapse in the equatorial Atlantic during the zenith of Middle Eocene Climatic Optimum warmth. Geology (Boulder Colo.) 47(3): 247-250. https://doi.org/10.1130/G45614.1 , more Geerlings, N.M.J.; Zetsche, E.M.; Hidalgo-Martinez, S.; Middelburg, J.J.; Meysman, F.J.R. (2019). Mineral formation induced by cable bacteria performing long-distance electron transport in marine sediments. Biogeosciences 16(3): 811-829. https://hdl.handle.net/10.5194/bg-16-811-2019, more González-Benítez, N.; García-Corral, L.S.; Morán, X.A.G.; Middelburg, J.J.; Pizay, M.-D.; Gattuso, J.P. (2019). Drivers of microbial carbon fluxes variability in two oligotrophic Mediterranean coastal systems. NPG Scientific Reports 9: 17669. https://dx.doi.org/10.1038/s41598-019-53650-z, more Lengger, S.K.; Rush, D.; Mayser, J.P.; Blewett, J.; Schwartz-Narbonne, R.; Talbot, H.M.; Middelburg, J.J.; Jetten, M.S.M.; Schouten, S.; Sinninghe Damsté, J.S. (2019). Dark carbon fixation in the Arabian Sea oxygen minimum zone contributes to sedimentary organic carbon (SOM). Global Biogeochem. Cycles 33(12): 1715-1732. https://dx.doi.org/10.1029/2019gb006282, more Weiss, G.M.; Roepert, A.; Middelburg, J.J.; Schouten, S.; Sinninghe Damsté, J.S; van der Meer, M.T.J. (2019). Hydrogen isotope fractionation response to salinity and alkalinity in a calcifying strain of Emiliania huxleyi. Org. Geochem. 134: 62-65. https://dx.doi.org/10.1016/j.orggeochem.2019.06.001, more Boudreau, B.P.; Middelburg, J.J.; Luo, Y. (2018). The role of calcification in carbonate compensation. Nature Geoscience 11(12): 894-900. https://dx.doi.org/10.1038/s41561-018-0259-5, more Frieling, J.; Reichart, G.-J.; Middelburg, J.J.; Röhl, U.; Westerhold, T.; Bohaty, S.M.; Sluijs, A. (2018). Tropical Atlantic climate and ecosystem regime shifts during the Paleocene–Eocene Thermal Maximum. Clim. Past 14(1): 39-55. https://dx.doi.org/10.5194/cp-14-39-2018, more Gattuso, J.P.; Magnan, A.K.; Bopp, L.; Cheung, W.W.L.; Duarte, C.M.; Hinkel, J.; McLeod, E.; Micheli, F.; Oschlies, A.; Williamson, P.; Billé, R.; Chalastani, V.I.; Gates, R.; Irisson, J.O.; Middelburg, J.; Pörtner, H.-O.; Rau, G.H. (2018). Ocean solutions to address climate change and its effects on marine ecosystems. Front. Mar. Sci. 5(337): 1-18. https://dx.doi.org/10.3389/fmars.2018.00337, more Lessin, G.; Artioli, Y.; Almroth-Rosell, E.; Blackford, J.C.; Dale, A. W.; Glud, R.N.; Middelburg, J.J.; Pastres, R.; Queirós, A.M.; Rabouille, C.; Regnier, P.; Soetaert, K.; Solidoro, C.; Stephens, N.; Yakushev, E. (2018). Modelling marine sediment biogeochemistry: current knowledge gaps, challenges, and some methodological advice for advancement. Front. Mar. Sci. 5: 19. https://doi.org/10.3389/fmars.2018.00019, more Sulu-Gambari, F; Hagens, M.; Behrends, T; Seitaj, D.; Meysman, F.J.R.; Middelburg, J.; Slomp, C.P. (2018). Phosphorus cycling and burial in sediments of a seasonally hypoxic marine basin. Est. Coast. 41(4): 921–939. https://dx.doi.org/10.1007/s12237-017-0324-0, more van Bree, L.G.J.; Peterse, F.; van der Meer, M.T.J.; Middelburg, J.J.; Negash, A.M.D.; De Crop, W.; Cocquyt, C.; Wieringa, J.J.; Verschuren, D.; Sinninghe Damsté, J.S. (2018). Seasonal variability in the abundance and stable carbon-isotopic composition of lipid biomarkers in suspended particulate matter from a stratified equatorial lake (Lake Chala, Kenya/Tanzania): Implications for the sedimentary record. Quat. Sci. Rev. 192: 208-224. https://doi.org/10.1016/j.quascirev.2018.05.023, more Van Oevelen, D.; Mueller, C.E.; Lundälv, T.; van Duyl, F.C.; de Goeij, J.M.; Middelburg, J.J. (2018). Niche overlap between a cold-water coral and an associated sponge for isotopically-enriched particulate food sources. PLoS One 13(3): e0194659. https://dx.doi.org/10.1371/journal.pone.0194659, more Christianen, M.J.A.; Middelburg, J.J.; Holthuijsen, S.J.; Jouta, J.; Compton, T.J.; van der Heide, T.; Piersma, T.; Sinninghe Damsté, J.S.; van der Veer, H.W.; Schouten, S.; Olff, H. (2017). Benthic primary producers are key to sustain the Wadden Sea food web: stable carbon isotope analysis at landscape scale. Ecology 98(6): 1498-1512. https://dx.doi.org/10.1002/ecy.1837, more Frieling, J.; Gebhardt, H.; Huber, M.; Adekeye, O.A.; Akande, S.O.; Reichart, G.-J.; Middelburg, J.J.; Schouten, S.; Sluijs, A. (2017). Extreme warmth and heat-stressed plankton in the tropics during the Paleocene-Eocene Thermal Maximum. Science Advances 3(3): e1600891. https://dx.doi.org/10.1126/sciadv.1600891, more Holding, J.M.; Duarte, C.M.; Delgado-Huertas, A.; Soetaert, K.; Vonk, J.E.; Agusti, S.; Wassmann, P.; Middelburg, J. (2017). Autochthonous and allochthonous contributions of organic carbon to microbial food webs in Svalbard fjords. Limnol. Oceanogr. 62(3): 1307-1323. https://dx.doi.org/10.1002/lno.10526, more Lammers, J.M.; Schubert, C.J.; Middelburg, J.J.; Reichart, G.J. (2017). Microbial carbon processing in oligotrophic Lake Lucerne (Switzerland): results of in situ ¹³C-labelling studies. Biogeochemistry 136(2): 131-149. https://dx.doi.org/10.1007/s10533-017-0389-7, more Le Guitton, M.; Soetaert, K.; Sinninghe Damsté, J.S.; Middelburg, J.J. (2017). A seasonal study of particulate organic matter composition and quality along an offshore transect in the southern North Sea. Est., Coast. and Shelf Sci. 188: 1-11. https://dx.doi.org/10.1016/j.ecss.2017.02.002, more Maugendre, L.; Gattuso, J.-P.; de Kluijver, A.; Soetaert, K.; van Oevelen, D.; Middelburg, J.J.; Gazeau, F. (2017). Carbon-13 labelling shows no effect of ocean acidification on carbon transfer in Mediterranean plankton communities. Est., Coast. and Shelf Sci. 186(Part A): 100-111. dx.doi.org/10.1016/j.ecss.2015.12.018, more Morales, C.; Rogov, M.; Wierzbowski, H.; Ershova, V.; Suan, G; Adatte, T.; Föllmi, K.B.; Tegelaar, E.; Reichart, G.-J.; de Lange, G.J.; Middelburg, J.J.; van de Schootbrugge, B. (2017). Glendonites track methane seepage in Mesozoic polar seas. Geology (Boulder Colo.) 45(6): 503-506. https://doi.org/10.1130/G38967.1, more Brouwer, G.M.; Duijnstee, I.A.P.; Hazeleger, J.H.; Rossi, F.; Lourens, L.J.; Middelburg, J.J; Wolthers, M. (2016). Diet shifts and population dynamics of estuarine foraminifera during ecosystem recovery after experimentally induced hypoxia crises. Est., Coast. and Shelf Sci. 170: 20-33. dx.doi.org/10.1016/j.ecss.2015.12.015, more Svensson, E.; Schouten, S.; Hopmans, E.C.; Middelburg, J.J.; Sinninghe Damsté, J.S. (2016). Factors Controlling the Stable Nitrogen Isotopic Composition (δ15N) of Lipids in Marine Animals. PLoS One 11(1): e0146321. https://dx.doi.org/10.1371/journal.pone.0146321, more Tadonléké, R.D.; Pollet, T.; van Rijswijk, P.; Leberre, B.; Middelburg, J.J. (2016). Effects of oxygen loss on carbon processing and heterotrophic prokaryotes from an estuarine ecosystem: results from stable isotope probing and cytometry analyses. Est. Coast. 39(4): 992-1005. http://dx.doi.org/10.1007/s12237-015-0053-1, more Van Oevelen, D.; Mueller, C.E.; Lundälv, T.; Middelburg, J.J. (2016). Food selectivity and processing by the cold-water coral Lophelia pertusa. Biogeosciences 13: 5789–5798. https://dx.doi.org/10.5194/bg-13-5789-2016, more Woulds, C.; Bouillon, S.; Cowie, G.L.; Drake, E.; Middelburg, J.J.; Witte, U. (2016). Patterns of carbon processing at the seafloor: the role of faunal and microbial communities in moderating carbon flows. Biogeosciences 13(15): 4343-4357. https://dx.doi.org/10.5194/bg-13-4343-2016, more Braeckman, U.; Provoost, P.; Sabbe, K.; Soetaert, K.; Middelburg, J.J.; Vincx, M.; Vanaverbeke, J. (2015). Temporal dynamics in a shallow coastal benthic food web: Insights from fatty acid biomarkers and their stable isotopes. Mar. Environ. Res. 108: 55-68. http://dx.doi.org/10.1016/j.marenvres.2015.04.010, more Brouwer, M.G.M.; Wolthers, M.; Hazeleger, J.H.; Rossi, F; Lourens, L.J.; Middelburg, J.J.; Duijnstee, I.A.P. (2015). Differential response of intertidal Foraminifera to community recovery following experimentally induced hypoxia. Journal of Foraminiferal Research 45(3): 220-234. http://dx.doi.org/10.2113/gsjfr.45.3.220, more de Kluijver, A.; Ning, J.; Liu, Z.; Jeppesen, E.; Gulati, R.D.; Middelburg, J.J. (2015). Macrophytes and periphyton carbon subsidies to bacterioplankton and zooplankton in a shallow eutrophic lake in tropical China. Limnol. Oceanogr. 60: 375-385. dx.doi.org/10.1002/lno.10040, more Hagens, M.; Slomp, C.P.; Meysman, F.J.R.; Seitaj, D.; Harlay, J.; Borges, A.V.; Middelburg, J.J. (2015). Biogeochemical processes and buffering capacity concurrently affect acidification in a seasonally hypoxic coastal marine basin. Biogeosciences 12(5): 1561-1583. dx.doi.org/10.5194/bg-12-1561-2015, more Kim, J.H.; Schouten, S.; Rodrigo-Gámiz, M.; Rampen, S.W.; Marino, G.; Huguet, C.; Helmke, P.; Buscail, R.; Hopmans, E.C.; Pross, J.; Sangiorgi, F.; Middelburg, J.; Sinninghe Damsté, J.S. (2015). Influence of deep-water derived isoprenoid tetraether lipids on the TEX ^h ₈₆ paleothermometer in the Mediterranean Sea. Geochim. Cosmochim. Acta 150: 125–141. dx.doi.org/10.1016/j.gca.2014.11.017, more Le Guitton, M.; Soetaert, K.; Sinninghe Damsté, J.S.; Middelburg, J.J. (2015). Biogeochemical consequences of vertical and lateral transport of particulate organic matter in the southern North Sea: A multiproxy approach. Est., Coast. and Shelf Sci. 165: 117-127. https://dx.doi.org/10.1016/j.ecss.2015.09.010, more Middelburg, J.J. (2015). Escape by dilution. Science (Wash.) 348(6232): 290. http://dx.doi.org/10.1126/science.aaa9852, more Middelburg, J.J.; Mueller, C.E.; Veuger, B.; Larsson, A.I.; Form, A.; van Oevelen, D. (2015). Discovery of symbiotic nitrogen fixation and chemoautotrophy in cold-water corals. NPG Scientific Reports 5(17962): 9 pp. http://dx.doi.org/10.1038/srep17962, more Svensson, E.; Schouten, S.; Stam, A.; Middelburg, J.J.; Sinninghe Damsté, J.S. (2015). Compound-specific stable isotope analysis of nitrogen-containing intact polar lipids. Rapid Comm. Mass Spectrom. 29(23): 2263–2271. dx.doi.org/10.1002/rcm.7393, more Vasquez-Cardenas, D.; van de Vossenberg, J.; Polerecky, L.; Malkin, S.Y.; Schauer, R.; Hidalgo-Martinez, S.; Confurius-Guns, V.; Middelburg, J.J.; Meysman, F.J.R.; Boschker, H.T.S. (2015). Microbial carbon metabolism associated with electrogenic sulphur oxidation in coastal sediments. ISME J. 9(9): 1966-1978. dx.doi.org/10.1038/ismej.2015.10, more de Kluijver, A.; Schoon, P.L.; Downing, J.A.; Schouten, S.; Middelburg, J.J. (2014). Stable carbon isotope biogeochemistry of lakes along a trophic gradient. 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Fate of peptidoglycan in an intertidal sediment: An in situ ¹³C-labeling study. Limnol. Oceanogr. 51(4): 1572-1580. http://dx.doi.org/10.4319/lo.2006.51.4.1572, more Vos, M.; Vet, L.E.M.; Wäckers, F.L.; Middelburg, J.J.; van der Putten, W.H.; Mooij, W.M.; Heip, C.H.R.; Van Donk, E. (2006). Infochemicals structure marine, terrestrial and freshwater food webs: Implications for ecological informatics. Ecological Informatics 1(1): 23-32, more Boschker, H.T.S.; Kromkamp, J.C.; Middelburg, J.J. (2005). Biomarker and carbon isotopic constraints on bacterial and algal community structure and functioning in a turbid, tidal estuary. Limnol. Oceanogr. 50(1): 70-80. https://dx.doi.org/10.4319/lo.2005.50.1.0070, more Duarte, A.C.; Middelburg, J.J.; Caraco, N. (2005). Major role of marine vegetation on the oceanic carbon cycle. Biogeosciences 2(1): 1-8. https://doi.org/10.5194/bgd-1-659-2004, more Gattuso, J.P.; Dawson, N.A.; Duarte, C.M.; Middelburg, J. (2005). 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Lett. 31(3): L03304 (1-4). https://dx.doi.org/10.1029/2003GL018756, more Boudreau, B.P.; Meysman, F.; Middelburg, J.J. (2004). Multicomponent ionic diffusion in porewaters: coulombic effects revisited. Earth Planet. Sci. Lett. 222(2): 653- 666, more Rochelle-Newall, E.; Pizay, M.D.; Middelburg, J.J.; Boschker, H.T.S.; Gattuso, J.P. (2004). Degradation of riverine dissolved organic matter by seawater bacteria. Aquat. Microb. Ecol. 37: 9-22, more Rossi, F.; Herman, P.M.J.; Middelburg, J.J. (2004). Interspecific and intraspecific variation of δ¹³C and δ¹⁵N in deposit- and suspension-feeding bivalves (Macoma balthica and Cerastoderma edule): evidence of ontogenetic changes in feeding mode of Macoma balthica. Limnol. Oceanogr. 49(2): 408-414, more Van den Meersche, K.; Middelburg, J.J.; Soetaert, K.; Van Rijswijk, P.; Boschker, H.T.S.; Heip, C.H.R. (2004). Carbon-nitrogen coupling and algal-bacterial interactions during an experimental bloom: modeling a ¹³C tracer experiment. Limnol. 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Factors controlling nitrous oxide at the microbial community and estuarine scale. Mar. Ecol. Prog. Ser. 240: 1-9. http://dx.doi.org/10.3354/meps240001, more Frankignoulle, M.; Middelburg, J.J. (2002). Biogases in tidal European Estuaries: the BIOGEST project. Biogeochemistry 59(1-2): 1-4. dx.doi.org/10.1023/A:1015544311392, more Gacia, E.; Duarte, C.M.; Middelburg, J. (2002). Carbon and nutrient deposition in a Mediterranean seagrass (Posidonia oceanica) meadow. Limnol. Oceanogr. 47: 23-32. https://dx.doi.org/10.4319/lo.2002.47.1.0023, more Middelburg, J.J.; Nieuwenhuize, J.; Iversen, N.; Høgh, N.; de Wilde, H.; Helder, W.; Seifert, R.; Christof, O. (2002). Methane distribution in European tidal estuaries. Biogeochemistry 59(1-2): 95-119. http://dx.doi.org/10.1023/A:1015515130419, more Moens, T.; Luyten, C.; Middelburg, J.J.; Herman, P.M.J.; Vincx, M. (2002). Tracing organic matter sources of estuarine tidal flat nematodes with stable carbon isotopes. Mar. Ecol. Prog. Ser. 234: 127-137. dx.doi.org/10.3354/meps234127, more Moodley, L.; Middelburg, J.J.; Boschker, H.T.S.; Duineveld, G.C.A.; Pel, R.; Herman, P.M. J.; Heip, C.H.R. (2002). Bacteria and foraminifera: Key players in a short-term deep-sea benthic response to phytodetritus. Mar. Ecol. Prog. Ser. 236: 23-29, more Moodley, L.; Middelburg, J.J.; Boschker, H.T.S.; Duineveld, G.C.A.; Pel, R.; Herman, P.M.J.; Heip, C.H.R. (2002). Erratum: Bacteria and foraminifera: Key players in a short-term deep-sea benthic response to phytodetritus. Mar. Ecol. Prog. Ser. 239: 230, more Wijsman, J.W.M.; Herman, P.M.J.; Middelburg, J.J.; Soetaert, K. (2002). A model for early diagenetic processes in sediments of the continental shelf of the Black Sea. Est., Coast. and Shelf Sci. 54(3): 403-421. https://dx.doi.org/10.1006/ecss.2000.0655, more Dauwe, B.; Middelburg, J.J.; Herman, P.M.J. (2001). Effect of oxygen on the degradability of organic matter in subtidal and intertidal sediments of the North Sea area. Mar. 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(2001). Benthic community structure and sediment processes on an intertidal flat: results from the ECOFLAT project. Cont. Shelf Res. 21(18-19): 2055-2071. http://dx.doi.org/10.1016/S0278-4343(01)00042-5, more Middelburg, J.J.; Nieuwenhuize, J. (2001). Nitrogen isotope tracing of dissolved inorganic nitrogen behaviour in tidal estuaries. Est., Coast. and Shelf Sci. 53(3): 385-391. https://dx.doi.org/10.1006/ecss.2001.0805, more Soetaert, K.; Herman, P.M.J.; Middelburg, J.J.; Heip, C.H.R.; Smith, C.L.; Tett, P.; Wild-Allen, K. (2001). Numerical modelling of the shelf break ecosystem: reproducing benthic and pelagic measurements. Deep-Sea Res., Part 2, Top. Stud. Oceanogr. 48(14-15): 3141-3177, more Wijsman, J.W.M.; Middelburg, J.J.; Herman, P.M.J.; Böttcher, M.E.; Heip, C.H.R. (2001). Sulfur and iron speciation in surface sediments along the northwestern margin of the Black Sea. Mar. 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Sea Res. 40(3-4): 263-280. dx.doi.org/10.1016/S1385-1101(98)00026-4, more Soetaert, K.; Herman, P.M.J.; Middelburg, J.J.; Heip, C.H.R. (1998). Assessing organic matter mineralization, degradability and mixing rate in an ocean margin sediment (Northeast Atlantic) by diagenetic modeling. J. Mar. Res. 56(2): 519-534, more Soetaert, K.; Vanaverbeke, J.; Heip, C.H.R.; Herman, P.M.J.; Middelburg, J.J.; Sandee, A.; Duineveld, G.C.A. (1997). Nematode distribution in ocean margin sediments of the Goban Spur (northeast Atlantic) in relation to sediment geochemistry. Deep-Sea Res., Part 1, Oceanogr. Res. Pap. 44(9-10): 1671-1683, more Middelburg, J. J.; Nieuwenhuize, J.; Slim, F. J.; Ohowa, B. (1996). Sediment biogeochemistry in an East African mangrove forest (Gazi Bay,Kenya). Biogeochemistry 34(3): 133-155, more Middelburg, J.J.; Klaver, G.; Nieuwenhuize, J.; Wielemaker, A.; Van der Nat, F.J.W.A.; Vlug, T. (1996). Organic matter mineralization in intertidal sediments along an estuarine gradient. Mar. Ecol. Prog. Ser. 132: 157-168. https://dx.doi.org/10.3354/meps132157, more Middelburg, J.J.; Soetaert, K.; Herman, P.M.J. (1996). Evaluation of the nitrogen isotope-pairing method for measuring benthic denitrification: A simulation analysis. Limnol. Oceanogr. 41(8): 1839-1844, more Middelburg, J.J.; Soetaert, K.; Herman, P.M.J.; Heip, C.H.R. (1996). Denitrification in marine sediments: a model study. Global Biogeochem. Cycles 10(4): 661-673, more Moodley, L.; Herman, P.M. J.; Middelburg, J.J.; Heip, C.H.R. (1996). Comment on: Subsurface activity of benthic foraminifera. Mar. Ecol. Prog. Ser. 145(1-3): 303-304, more Soetaert, K.; Herman, P.M.J.; Middelburg, J.J. (1996). Dynamic response of deep-sea sediments to seasonal variations: a model. Limnol. Oceanogr. 41(8): 1651-1668. http://dx.doi.org/10.4319/lo.1996.41.8.1651, more Soetaert, K.; Herman, P.M.J.; Middelburg, J.J.; Heip, C.H.R.; deStigter, H.S.; van Weering, T.C.E.; Epping, E.; Helder, W. (1996). Modeling ²¹⁰Pb-derived mixing activity in ocean margin sediments: diffusive versus nonlocal mixing. J. Mar. Res. 54: 1207-1227, more Soetaert, K.; Herman, P.M.J.; Middelburg, J.J. (1996). A model of early diagenetic processes from the shelf to abyssal depths. Geochim. Cosmochim. Acta 60(6): 1019-1040. http://dx.doi.org/10.1016/0016-7037(96)00013-0, more Heip, C.H.R.; Goosen, N.K.; Herman, P.M.J.; Kromkamp, J.; Middelburg, J.J.; Soetaert, K. (1995). Production and consumption of biological particles in temperate tidal estuaries, in: Ansell, A.D. et al. Oceanogr. Mar. Biol. Ann. Rev. 33. Oceanography and Marine Biology: An Annual Review, 33: pp. 1-149, more Middelburg, J.J.; Klaver, G.; Nieuwenhuize, J.; Markusse, R.; Vlug, T.; Van der Nat, F.J.W.A. (1995). Nitrous oxide emissions from estuarine intertidal sediments. Hydrobiologia 311(1-3): 43-55. https://dx.doi.org/10.1007/BF00008570, more Middelburg, J.J.; Klaver, G.; Nieuwenhuize, J.; Vlug, T. (1995). Carbon and nitrogen cycling in intertidal sediments near Doel, Scheldt Estuary. Hydrobiologia 311(1-3): 57-69. https://dx.doi.org/10.1007/BF00008571, more
Peer reviewed publications (13) [show]
Hofmann, A.F.; Meysman, F.J.R.; Soetaert, K.; Middelburg, J.J. (2009). Factors governing the pH in a heterotrophic, turbid, tidal estuary. Biogeosci. Discuss. 6: 197-240. dx.doi.org/10.5194/bgd-6-197-2009, more Hofmann, A.F.; Soetaert, K.; Middelburg, J.J. (2008). Nitrogen and carbon dynamics in the Scheldt estuary at the beginning of the 21st century - a modelling study. Biogeosci. Discuss. 5: 83-161, more Gazeau, F.; Middelburg, J.J.; Loijens, M.; Vanderborght, J.-P.; Pizay, M.-D.; Gattuso, J.P. (2006). Phytoplanktonic primary production in a nutrient-rich estuary - comparison of methods. Geophys. Res. Abstr. 8: 01682, more Meysman, F.J.R.; Galaktionov, O.S.; Cook, P.L.M.; Janssen, F.; Huettel, M.; Middelburg, J.J. (2006). Quantifying biologically and physically induced flow and tracer dynamics in permeable sediments. Biogeosci. Discuss. 3: 1809-1858, more Bontes, B.M.; Pel, R.; Ibelings, B.W.; Boschker, H.T.S.; Middelburg, J.J.; Van Donk, E. (2005). The effects of biomanipulation on the biogeochemistry, carbon isotopic composition and pelagic food web relations of a shallow turf lake. Biogeosci. Discuss. 2(4): 997-1031. https://dx.doi.org/10.5194/bgd-2-997-2005, more Gazeau, F.; Gattuso, J.P.; Middelburg, J.J.; Brion, N.; Schiettecatte, L.-S.; Frankignoulle, M.; Borges, A.V. (2005). Planktonic and whole system metabolism in a nutrient-rich estuary (the Scheldt estuary). Estuaries 28(6): 868-883. http://dx.doi.org/10.1007/BF02696016, more Rochelle-Newall, E.J.; Barrón, C.; Borges, A.V.; Duarte, C.M.; Frankignoulle, M.; Gazeau, F.; Middelburg, J.J.; Pizay, M.-D.; Thioulouse, J.; Gattuso, J.P. (2005). Community metabolism in three contrasting coastal ecosystems. Geophys. Res. Abstr. 7: 09330, more Gazeau, F.; Borges, A.V.; Schiettecatte, L.-S.; Middelburg, J.; Frankignoulle, M.; Gattuso, J.P. (2004). Pelagic metabolism of the Scheldt estuary on an annual scale. Geophys. Res. Abstr. 6: 05737, more Middelburg, J.J.; Soetaert, K.; Herman, P.M.J. (1996). Empirical relationships for use in global diagenetic models. Deep-Sea Res. 44(2): 327-344, more de Lange, G.J.; Middelburg, J.J.; Poorter, R.P.; Shofiyah, S. (1989). Ferromanganese encrustations on the seabed west of Misool, eastern Indonesia. Neth. J. Sea Res. 24(4): 541-553, more Middelburg, J.J.; de Lange, G.J.; van der Weijden, C.H.; Shofiyah, S. (1989). Sediment chemistry of Kau Bay, Halmahera (eastern Indonesia). Neth. J. Sea Res. 24(4): 607-613, more Middelburg, J.J.; de Lange, G.J. (1989). The isolation of Kau Bay during the last glaciation: direct evidence from interstitial water chlorinity. Neth. J. Sea Res. 24(4): 615-622, more van der Weijden, C.H.; de Lange, G.J.; Middelburg, J.J.; van der Sloot, H.A.; Hoede, D.; Shofiyah, S. (1989). Geochemical characteristics of Kau Bay water. Neth. J. Sea Res. 24(4): 583-589, more
Books (2) [show]
Middelburg, J.J. (2019). Marine carbon biogeochemistry: A primer for earth system scientists. SpringerBriefs in Earth System Sciences. Springer: Cham. vi, 118 pp. https://dx.doi.org/10.1007/978-3-030-10822-9, more Wolanski, E.; Mclusky, D.S.; Laane, R.W.P.; Middelburg, J.J. (Ed.) (2011). Treatise on Estuarine and Coastal Science: 5. Biogeochemistry. Elsevier: Amsterdam. ISBN 978-0-12-387745-1. 362 pp., more
Book chapters (36) [show]
Hagens, M.; Slomp, C.P.; Meysman, F.J.R.; Brenner, H.; Borges, A.V.; Middelburg, J.J. (2013). The influence of biogeochemical processes on the pH dynamics in the seasonally hypoxic saline Lake Grevelingen, The Netherlands, in: The 45th International Liège Colloquium on Ocean Dynamics. The variability of primary production in the ocean: from the synoptic to the global scale, Liège, Belgium, 13-17 May, 2013: Abstracts. pp. [1], more Braeckman, U.; Provoost, P.; Sabbe, K.; Middelburg, J.J.; Soetaert, K.; Vincx, M.; Vanaverbeke, J. (2011). Temporal variation in macrobenthic diet as inferred from fatty acid biomarkers, in: Braeckman, U. Macrobenthos structuring the sea floor: importance of its functional biodiversity for the benthic ecosystem = De structurerende rol van macrobenthos in de zeebodem: belang van de functionele biodiversiteit voor het benthische ecosysteem. pp. 103-130, more Braeckman, U.; Provoost, P.; Gribsholt, B.; Van Gansbeke, D.; Middelburg, J.; Soetaert, K.; Vincx, M.; Vanaverbeke, J. (2011). Role of macrofauna functional traits and density in biogeochemical fluxes and bioturbation, in: Braeckman, U. Macrobenthos structuring the sea floor: importance of its functional biodiversity for the benthic ecosystem = De structurerende rol van macrobenthos in de zeebodem: belang van de functionele biodiversiteit voor het benthische ecosysteem. pp. 25-50, more Braeckman, U.; Provoost, P.; Moens, T.; Soetaert, K.; Middelburg, J.J.; Vincx, M.; Vanaverbeke, J. (2011). Biological vs. physical mixing effects on benthic food web dynamics, in: Braeckman, U. Macrobenthos structuring the sea floor: importance of its functional biodiversity for the benthic ecosystem = De structurerende rol van macrobenthos in de zeebodem: belang van de functionele biodiversiteit voor het benthische ecosysteem. pp. 77-101, more Gazeau, F.; Middelburg, J.J.; Heip, C.H. (2011). Benthic calcification in the Dutch Coastal zone and effect on ocean acidification on the growth of commercially important bivalve species, in: Heip, C. et al. (Ed.) Aspects of coastal research in contribution to LOICZ in the Netherlands and Flanders (2002-2010). LOICZ Research & Studies, 38: pp. 108-116, more Heip, C.H.R.; Middelburg, J.J.; Philippart, C.J.M. (2011). Functioning of ecosystems at the land-ocean interface, in: Wolanski, E. et al. (Ed.) Treatise on Estuarine and Coastal Science: 7. Functioning ecosystems at the land-ocean interface. pp. 1-3. dx.doi.org/10.1016/B978-0-12-374711-2.00701-4, more Middelburg, J.J.; Andersson, M.; Boschker, E.; Brion, N.; Dehairs, F.; Dijkman, N.; Kromkamp, J.C.; Soetaert, K. (2011). Carbon and nitrogen cycling in the Scheldt estuary: the major players, long-term changes and an integrated view, in: Heip, C. et al. (Ed.) Aspects of coastal research in contribution to LOICZ in the Netherlands and Flanders (2002-2010). LOICZ Research & Studies, 38: pp. 148-154, more Moens, T.; Moodley, L.; Steyaert, M.; Van Colen, C.; Van Oevelen, D.; Boschker, H.T.S.; Herman, P.M.J.; Middelburg, J.J.; Soetaert, K.; Ysebaert, T.; Vincx, M. (2011). The structure and functional roles of tidal flat meiobenthos, in: Heip, C. et al. (Ed.) Aspects of coastal research in contribution to LOICZ in the Netherlands and Flanders (2002-2010). LOICZ Research & Studies, 38: pp. 171-184, more Van den Meersche, K.; Soetaert, K.; Middelburg, J.J. (2009). A Bayesian Compositional Estimator for microbial taxonomy based on biomarkers, in: Van den Meersche, K. Carbon flows in the planktonic food web of temperate estuaries: a combined approach using stable isotopes, biomarkers and modeling. pp. 51-66, more Van den Meersche, K.; Middelburg, J.J.; Soetaert, K.; Van Rijswijk, P.; Boschker, H.T.S.; Heip, C.H.R. (2009). Carbon-nitrogen coupling and algal-bacterial interactions during an experimental bloom: modeling a ¹³C tracer experiment, in: Van den Meersche, K. Carbon flows in the planktonic food web of temperate estuaries: a combined approach using stable isotopes, biomarkers and modeling. pp. 97-129, more Van den Meersche, K.; Soetaert, K.; Dijkman, N.A.; Middelburg, J.J. (2009). Plankton dynamics in an estuarine plume: a ¹³C and ¹⁵N tracer study, in: Van den Meersche, K. Carbon flows in the planktonic food web of temperate estuaries: a combined approach using stable isotopes, biomarkers and modeling. pp. 131-160, more Kroeze, C.; Middelburg, J.J.; Leemans, R.; Escobar-Briones, E.; Fennel, W.; Glaser, M.; Harashima, A.; Liu, K.-K.; Meybeck, M. (2008). Integrating tools to assess changes in semi-enclosed marine systems, in: Urban Jr., E.R. et al. (Ed.) Watersheds, bays, and bounded seas: The science and management of semi-enclosed marine systems. Scientific Committee on Problems of the Environment (SCOPE) Series, 70: pp. 77-96, more Middelburg, J.J.; Herman, P.M.J. (2007). Organic matter processing in tidal estuaries, in: Goldberg, E.D. (Ed.) (1974). Marine chemistry. The sea: ideas and observations on progress in the study of the seas, 5: pp. 127-147. http://dx.doi.org/10.1016/j.marchem.2006.02.007, more van Tussenbroek, B.I.; Vonk, J.A.; Stapel, J.; Erftemeijer, P.L.A.; Middelburg, J.J.; Zieman, J.C. (2006). The biology of Thalassia: paradigms and recent advances in research, in: Larkum, A.W.D. et al. (Ed.) Seagrasses: biology, ecology and conservation. pp. 409-439, more Aristegui, J.; Agusti, S.; Middelburg, J.J.; Duarte, C.M. (2005). Respiration in the mesopelagic and bathypelagic zones of the ocean, in: del Giorgio, P.A. et al. (Ed.) Respiration in aquatic ecosystems. pp. 181-205, more Heip, C.H.R.; Herman, P.M.J.; Middelburg, J.J.; Moodley, L.; Soetaert, K.; Ysebaert, T.J. (2005). The ecology of estuarine intertidal flats: the example of the Westerschelde, in: Wilson, J.G. (Ed.) The intertidal ecosystem: the value of Ireland’s shores. pp. 179-195, more Meysman, F.J.R.; Galaktionov, O.S.; Madani, S.; Middelburg, J.J. (2005). Modelling biological interactions in aquatic sediments as coupled reactive transport, in: Kristensen, E. et al. (Ed.) Interactions between macro- and microorganisms in marine sediments. Coastal and Estuarine Studies, 60: pp. 359-388, more Middelburg, J.J.; Duarte, C.M.; Gattuso, J.P. (2005). Respiration in coastal benthic communities, in: del Giorgio, P.A. et al. (Ed.) Respiration in aquatic ecosystems. pp. 207-225, more Middelburg, J.J.; Soetaert, K. (2005). The role of sediments in shelf ecosystem dynamics, in: Robinson, A.R. et al. (Ed.) The global coastal ocean. Multiscale interdisciplinary processes. The sea: ideas and observations on progress in the study of the seas, 13: pp. 353-374, more Struyf, E.; Dausse, A.; Van Damme, S.; Bal, K.; Gribsholt, B.; Boschker, E.; Middelburg, J.; Meire, P. (2005). Tidal marshes and biogenic silica recycling at the land-sea interface, in: Struyf, E. The role of freshwater marshes in estuarine silica cycling (Scheldt estuary) = De rol van zoetwaterschorren in de estuariene siliciumcyclus (Schelde-estuarium). pp. 75-97, more Struyf, E.; Van Damme, S.; Gribsholt, B.; Middelburg, J.J.; Meire, P. (2005). Biogenic silica in freshwater marsh sediments and vegetation (Schelde estuary, Belgium), in: Struyf, E. The role of freshwater marshes in estuarine silica cycling (Scheldt estuary) = De rol van zoetwaterschorren in de estuariene siliciumcyclus (Schelde-estuarium). pp. 33-58, more Middelburg, J.J.; Soetaert, K.; Herman, P.M.J.; Boschker, H.T.S.; Heip, C.H.R. (2004). Burial of nutrient in coastal sediments: the role of primary producers, in: Nielsen, S.L. et al. (Ed.) Estuarine nutrient cycling: the influence of primary producers: the fate of nutrients and biomass. Aquatic Ecology Series, 2: pp. 217-230, more Middelburg, J.J.; Soetaert, K.; Herman, P.M.J.; Boschker, H.T.S.; Heip, C.H.R. (2004). Burial of nutrient in coastal sediments: the role of primary producers, in: Nielsen, S.L. et al. (Ed.) Estuarine nutrient cycling: the influence of primary producers: the fate of nutrients and biomass. Aquatic Ecology Series, 2: pp. 217-230, more Van den Meersche, K.; Middelburg, J.J.; Soetaert, K.; Van Rijswijk, P. (2003). Coupling of the carbon and nitrogen metabolism of algae and bacteria: modelling a ¹³C pulse-chase experiment, in: Van den Meersche, K. Koppeling van koolstof- en stikstofmetabolisme van algen en bacteriën in een estuarien pelagisch ecosysteem: bepaling door modelleren van een pulse-chase experiment met ¹³C-labelling. pp. A1-A15, more Brion, N.; De Galan, S.; Billen, G.; Garnier, J.; Middelburg, J. (2002). The nitrogen cycle in the Seine and Scheldt estuaries, in: ECSA Local Meeting: ecological structures and functions in the Scheldt Estuary: from past to future, Antwerp, Belgium October 7-10, 2002: abstract book. pp. 24, more Meysman, F.J.R.; Middelburg, J.J.; Herman, P.M.J.; Heip, C.H.R. (2002). In the wake of Darwin: using ab-initio continuum mechanics to describe the influence of macro-organisms on sediments, in: Hassanizader, S.M. et al. Computational methods in water resources, vol. 1(1). Developments in Water Science, 47: pp. 587-593, more Middelburg, J.J.; de Bie, M.J.M.; Nieuwenhuize, J. (2002). Methane and nitrous oxide in tidal estuaries, in: ECSA Local Meeting: ecological structures and functions in the Scheldt Estuary: from past to future, Antwerp, Belgium October 7-10, 2002: abstract book. pp. 22, more Soetaert, K.; Middelburg, J.; Wijsman, J.W.M.; Herman, P.M.J.; Heip, C.H.R. (2002). Ocean margin early diagenetic processes and models, in: Wefer, G. et al. (Ed.) Ocean margin systems. pp. 157-177, more Wijsman, J.W.M.; Middelburg, J.J.; Soetaert, K.; Herman, P.M.J. (2001). Benthic mineralization in marine environments, in: Wijsman, J.W.M. Early diagenetic processes in northwestern Black Sea sediments. NIOO Thesis, 8: pp. 7-21, more Wijsman, J.W.M.; Herman, P.M.J.; Middelburg, J.J.; Soetaert, K. (2001). A model for early diagenetic processes in sediments of the continental shelf of the Black Sea, in: Wijsman, J.W.M. Early diagenetic processes in northwestern Black Sea sediments. NIOO Thesis, 8: pp. 43-66, more Dauwe, B.; Middelburg, J.J.; Van Rijswijk, P.; Sinke, J.; Herman, P.M.J.; Heip, C.H.R. (1999). Enzymatically hydrolyzable amino acids in North Sea sediments and their possible implication for sediment nutritional values, in: Dauwe, B. Organic matter quality in North Sea sediments. pp. 39-62, more de Wilde, H.P.J.; Helder, W.; Van Raaphorst, W.; Middelburg, J.J.; Sinjewel, A.; Visser, R.J.W. (1999). Methane in the Rhine estuary, its lower tributaries, and adjacent coastal waters, in: de Wilde, H.P.J. Nitrous oxide and methane in marine systems. pp. 75-97, more Dauwe, B.; Middelburg, J.J. (1998). Amino acids and hexosamines as indicators of organic matter degradation state in North Sea sediments, in: Dauwe, B. (1999). Organic matter quality in North Sea sediments. pp. 89-112, more Middelburg, J.J.; Nieuwenhuize, J.; Markusse, R.; Ohowa, B. (1995). Some preliminary results on the biogeochemistry of mangrove sediments from Gazi Bay, in: Heip, C.H.R. et al. (Ed.) Monsoons and coastal ecosystems in Kenya. pp. 51-66, more Middelburg, J.J.; Klaver, G.; Nieuwenhuize, J.; Markusse, R.; Vlug, T.; Van der Nat, F.J.W.A. (1995). Nitrous oxide emissions from estuarine intertidal sediments, in: Heip, C.H.R. et al. Major biological processes in European tidal estuaries. Developments in Hydrobiology, 110: pp. 43-55, more Middelburg, J.J.; Klaver, G.; Nieuwenhuize, J.; Vlug, T. (1995). Carbon and nitrogen cycling in intertidal sediments near Doel, Scheldt Estuary, in: Heip, C.H.R. et al. Major biological processes in European tidal estuaries. Developments in Hydrobiology, 110: pp. 57-69, more
Abstracts (18) [show]
Braeckman, U.; Provoost, P.; Soetaert, K.; Middelburg, J.J.; Vincx, M.; Vanaverbeke, J. (2009). Does macrofauna affect the benthic processing of a settling phytoplankton bloom?, in: Mees, J. et al. (Ed.) Book of abstracts: an overview of marine research in Belgium anno 2009. 10th VLIZ Young Scientists' Day. Special edition at the occasion of 10 years VLIZ. VLIZ Special Publication, 43: pp. 23, more De Laender, F.; Soetaert, K.; Janssen, C.R.; Middelburg, J.J. (2009). Stressor effects on aquatic food web functioning: methodology and case study, in: Mees, J. et al. (Ed.) Book of abstracts: an overview of marine research in Belgium anno 2009. 10th VLIZ Young Scientists' Day. Special edition at the occasion of 10 years VLIZ. VLIZ Special Publication, 43: pp. 43, more De Laender, F.; van Oevelen, D.; Frantsen, S.; Soetaert, K.; Janssen, C.R.; Middelburg, J.J. (2009). Seasonal PCB bioaccumulation in an Arctic marine ecosystem: a model analysis, in: Mees, J. et al. (Ed.) Book of abstracts: an overview of marine research in Belgium anno 2009. 10th VLIZ Young Scientists' Day. Special edition at the occasion of 10 years VLIZ. VLIZ Special Publication, 43: pp. 44, more Van Colen, C.; Montserrat, F.; Middelburg, J.J.; Herman, P.M.; Andersson, M.; Rossi, F.; Gribsholt, B.; Vincx, M.; Ysebaert, T.; Degraer, S. (2009). Restoration of estuarine tidal mudflat sediments after hypoxia, in: ASLO Aquatic Sciences Meeting 2009: A Cruise Through Nice Waters, 25-30 January 2009, Nice, France. pp. 272, more van den Heuvel-Greve, M.J.; van Duren, L.A.; Brasseur, S.M.; Middelburg, J.J.; Leonards, P.E.; Zabel, A.K.; Vethaak, A.D. (2009). A novel method in dietary studies using ecotoxicological data, in: ASLO Aquatic Sciences Meeting 2009: A Cruise Through Nice Waters, 25-30 January 2009, Nice, France. pp. 273, more Van Oostende, N.; Boschker, H.T.S.; Middelburg, J.J.; Vyverman, W.; Sabbe, K. (2009). Bacterial influence on the extracellular carbohydrate pool in experimental Emiliania huxleyi blooms, in: Mees, J. et al. (Ed.) VLIZ Young Scientists' Day, Brugge, Belgium 6 March 2009: book of abstracts. VLIZ Special Publication, 41: pp. 73, more Braeckman, U.; Vincx, M.; Provoost, P.; Gribsholt, B.; Middelburg, J.; Soetaert, K.; Van Gansbeke, D.; Vanaverbeke, J. (2008). The role of macrofauna in the functioning of a sea floor: is there any seasonal, density or functional identity effect?, in: World Conference on Marine Biodiversity, Valencia, Spain, 11-15 November 2008: book of abstracts. pp. 1, more Braeckman, U.; Provoost, P.; Gribsholt, B.; Middelburg, J.; Soetaert, K.; Vincx, M.; Vanaverbeke, J. (2008). The role of macrofauna in the functioning of a sea floor: is there any seasonal, density or functional identity effect?, in: Mees, J. et al. (Ed.) VLIZ Young Scientists' Day, Brugge, Belgium, 29 February 2008: book of abstracts. VLIZ Special Publication, 40: pp. 33, more Van Colen, C.; Vincx, M.; Montserrat, F.; Middelburg, J.; Herman, P.; Andersson, M.; Rossi, F.; Gribsholt, B.; Ysebaert, T. (2008). Benthic and biogeochemical recovery after and induced hypoxic event: the structuring role of macrofauna succession, in: World Conference on Marine Biodiversity, Valencia, Spain, 11-15 November 2008: book of abstracts. pp. 2, more Vos, M.; Soetaert, K.; Heip, C.; Middelburg, J.; Herman, P. (2008). Biodiversity, trait dynamics and ecosystem processes under gradual and catastrophic disturbance: a model analysis, in: World Conference on Marine Biodiversity, Valencia, Spain, 11-15 November 2008: book of abstracts. pp. 1, more Frankignoulle, M.; Borges, A.V.; Gazeau, F.; Delille, B.; Schiettecatte, L.-S.; Gattuso, J.P.; Rochelle-Newall, E.; González-Benítez, N.; Bonilla-Findji, O.; Pizay, M.D.; Wollast, R.; Vanderborcht, J.P.; Chou, L.; Loijens, M.; Folmer, I.; Middelburg, J.J.; Van den Meersche, K.; Boschker, H.T.S.; Veuger, B.; Duarte, C.M.; Barron, C.; Navarro, N.; Iversen, N.; Elliot, M.; Hemingway, K.L.; Burdon, D.; Campuzano-Guillen, F.J.; Allen, J. (2007). Nutrients cycling and the trophic status of coastal ecosystems (EUROTROPH), in: Cieslikiewicz, W. et al. (Ed.) Proceedings of the EurOCEAN 2004: European Conference on Marine Science & Ocean Technology: Celebrating European marine science; building the European research area; communicating marine science, Galway, Ireland, 10-13 May 2004. pp. 282-283, more Vandewiele, S.; Kayal, E.; van Oevelen, D.; Middelburg, J.J. (2007). An isotope dilution approach to assess the nutritional value of detritus, in: Mees, J. et al. (Ed.) VLIZ Young Scientists' Day, Brugge, Belgium 2 March 2007: book of abstracts. VLIZ Special Publication, 39: pp. 67, more Frankignoulle, M.; Borges, A.V.; Gazeau, F.; Delille, B.; Schiettecatte, L.-S.; Gattuso, J.P.; Rochelle-Newall, E.; González-Benítez, N.; Bonilla-Findji, O.; Pizay, M.D.; Wollast, R.; Vanderborcht, J.P.; Chou, L.; Loijens, M.; Folmer, I.; Middelburg, J.J.; Van den Meersche, K.; Boschker, H.T.S.; Veuger, B.; Duarte, C.M.; Barron, C.; Navarro, N.; Iversen, N.; Elliot, M.; Hemingway, K.L.; Burdon, D.; Campuzano-Guillen, F.J.; Allen, J. (2004). Nutrients cycling and the trophic status of coastal ecosystems (EUROTROPH), in: European Conference on Marine Science and Ocean Technology. Celebrating European marine science: building the European research area: communicating marine science, 10th - 13th May 2004, Galway, Ireland: abstract book. pp. 118-119, more Gazeau, F.; Borges, A.V.; Schiettecatte, L.-S.; Middelburg, J.; Frankignoulle, M.; Gattuso, J.P. (2004). Pelagic metabolism of the Scheldt estuary measured by the oxygen method on an annual scale, in: Mees, J. et al. (Ed.) VLIZ Young Scientists' Day, Brugge, Belgium 5 March 2004: book of abstracts. VLIZ Special Publication, 17: pp. 49, more Van den Meersche, K.; Soetaert, K.; Middelburg, J.; Heip, C.H.R.; Vincx, M. (2004). The microbial food web in the estuarine water column: a link or a sink?, in: Mees, J. et al. (Ed.) VLIZ Young Scientists' Day, Brugge, Belgium 5 March 2004: book of abstracts. VLIZ Special Publication, 17: pp. 74, more Galaktionov, O.S.; Meysman, F.J.R.; Middelburg, J.J. (2003). Bio-irrigation induced by Arenicola marina: classical assumptions vs. numerical modeling, in: Rullkötter, J. (Ed.) Biogeochemistry of tidal flats: Proceedings of a workshop at the Hanse Institute of Advanced Study, May 14-17, Delmenhorst, Germany. Abstract volume. Forschungszentrum Terramare Berichte, 12: pp. 59-62, more Meysman, F.J.R.; Heip, C.H.R.; Herman, P.M.J.; Middelburg, J.J. (2001). MEDIA: a modelling environment for surface sediment biogeochemistry, in: VLIZ Young Scientists' Day, Brugge, Belgium 23 February 2001: book of abstracts. VLIZ Special Publication, 1: pp. 50-51, more Heip, C.; Herman, P.; Middelburg, J.; Soetaert, K. (1998). Effects of physical impacts on estuarine ecosystems, in: ECSA 29 Symposium. Estuarine Research and Management in Developed and Developping countries: Joint ECSA and CERM symposium at the University of Port Elizabeth 13-17 July 1998. Abstract book. pp. 43, more
Other publications (7) [show]
Van den Meersche, K.; Van Rijswijk, P.; Soetaert, K.; Middelburg, J.J. (2009). Autochthonous and allochthonous contributions to mesozooplankton diet in a tidal river and estuary: integrating carbon isotope and fatty acid constraints, in: Van den Meersche, K. Carbon flows in the planktonic food web of temperate estuaries: a combined approach using stable isotopes, biomarkers and modeling. pp. 73-96, more Vandewiele, S.; Kayal, E.; van Oevelen, D.; Middelburg, J.J. (2007). An isotope dilution approach to assess the nutritional value of detritus. Netherlands Institute of Ecology (NIOO): Yerseke. 1 poster pp., more Struyf, E.; Meire, P.; Van Damme, S.; Middelburg, J. (2006). Zoetwaterschorren als siliciumbuffers in het Schelde-estuarium. Water Nieuwsbrief 24, more Madani, S.; Meysman, F.J.R.; Middelburg, J.J. (2003). Biogeochemical modelling of sediments from the Santa Barbara basin (California). Berichte (Forsch.zent. Terramare) 12: 89-90, more Meysman, F.J.R.; Boudreau, B.P.; Middelburg, J.J. (2003). New developments in the modelling of bioturbation in aquatic sediments: relations between local, non-local, discrete and continuous models. Berichte (Forsch.zent. Terramare) 12: 91-93, more Dauwe, B.; Middelburg, J.J.; Herman, P.M.J.; Heip, C.H.R. (1999). Particulate organic matter degradation in the ocean: changes in biochemical composition and reactivity are linked, in: Dauwe, B. Organic matter quality in North Sea sediments. pp. 113-120, more Dauwe, B.; Middelburg, J.J.; Herman, P.M.J. (1999). Degradability of organic matter in subtidal and intertidal sediments of the North Sea area, in: Dauwe, B. Organic matter quality in North Sea sediments. pp. 63-87, more
Thesis (co-)promotor (13) [show]
Mueller, C.E. (2014). The sum is more than its parts: key species in the functioning of cold-water coral reefcommunities. PhD Thesis. Utrecht University: [s.l.]. 158 pp. https://hdl.handle.net/1874/290254, more de Kluijver, A. (2012). Carbon flows in natural plankton communities in the Anthropocene. PhD Thesis. Universiteit Utrecht: [s.l.]. ISBN 978-90-3935-846-7. 1-150 pp. hdl.handle.net/1874/258022, more Pozzato, L. (2012). Prokaryotic, protozoan and metazoan processing of organic matter in sediments: a tracer approach. PhD Thesis. Rijksuniversiteit Utrecht: [s.l.]. 154 pp. hdl.handle.net/1874/256528, more Hofmann, A.F. (2009). Kwantificatie van de invloed van biogeochemische processen op de pH van natuurlijke wateren = Quantifying the influences of biogeochemical processes on pH of natural waters. PhD Thesis. University of Utrecht: Utrecht. ISBN 978-90-5744-166-0. 248 pp., more Van den Meersche, K. (2009). Carbon flows in the planktonic food web of temperate estuaries: a combined approach using stable isotopes, biomarkers and modeling. PhD Thesis. Universiteit Gent, Vakgroep Biologie, Sectie Mariene Biologie: Gent. 199 pp., more Evrard, V. (2007). Stabiele isotopen van koolstof en stikstof als merkers voor de transformaties van organisch materiaal in subtidale zandbodems = Assessing the fate of organic matter in subtidal sandy sediments using carbon and nitrogen stable isotopes as deliberate tracers. PhD Thesis. Universiteit Utrecht: Utrecht. ISBN 978-90-5744-142-4. 119 pp., more Andersson, J.H. (2006). Sedimentrespiratie in de overgang van het continentale plat naar de diepe oceaan = Respiration in ocean margin sediments. PhD Thesis. NIOO: Utrecht. ISBN 978-90-5744-148-6. 171 pp., more Veuger, B. (2006). Een nieuwe methode voor het traceren van stikstof- en koolstofstromen door bacteriën en algen in aquatische microbiële gemeenschappen: Analyse van 15N- en 13C-incorporatie in D-alanine en andere hydrolyseerbare aminozuren = A new method for tracing flows of nitorgen and carbon through bacteria and algae in aquatic microbial communities : Analysis of 15N- and 13C-incorporation into D-alanine and other hydrolysable amino acids. NIOO Thesis, 47. PhD Thesis. Universiteit Utrecht: Utrecht. ISBN 90-5744-129-2. 153 pp., more Struyf, E. (2005). The role of freshwater marshes in estuarine silica cycling (Scheldt estuary) = De rol van zoetwaterschorren in de estuariene siliciumcyclus (Schelde-estuarium). PhD Thesis. Universiteit Antwerpen: Antwerpen. 162 pp., more van Oevelen, D. (2005). The structure of marine benthic food webs: combining stable isotope techniques and inverse modeling. PhD Thesis. Rijksuniversiteit Groningen: Groningen. 143 pp., more Ferro, I. (2003). Cycling of iron and manganese in freshwater, estuarine and deep sea sediments. PhD Thesis. Rijksuniversiteit Groningen: Groningen. 162 pp., more Van der Nat, F.J.W.A. (2000). Methane emission from freshwater marshes. PhD Thesis. Katholieke Universiteit: Nijmegen. ISBN 90-9013529-4. 133 pp., more Andersson, M. [s.d.]. De stikstofkringloop in een troebel getijdenestuarium = Nitrogen cycling in a turbid, tidal estuary. Mededelingen Faculteit Geowetenschappen Universiteit Utrecht, 282. PhD Thesis. [S.n.]: Utrecht. ISBN 978-90-5744-147-9. 172 pp., more

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