| Publications | Institutes | Persons | Datasets | Projects | Maps | Infrastructure | ||||
ARMS-MBON data on long-term monitoring of hard-bottom communities: COI results from 2020-2022
Citation
Pagnier J.; Allcock L.; Cancio I.; Chatzinikolaou E.; Chatzigeorgiou G.; Chrismas NAM.; Costantini F.; Dailianis T.; Deneudt K.; Diaz de Cerio, O.; Digenis M.; Exter K.; GerovasileiouV.; , González Fernández J.; Kauppi L.; Keklikoglou K.; Kristoffersen JB.; Lagaisse R.; Mavrič B.; Mortelmans J.; Paredes E.; Pavloudi C.; Piazza A.; Power AM.; Ramšak A.; Santi I.; Solbakken J.; Stavroulaki M.; Stæhr PAU.; Tajadura J.; Souza Troncoso J.; Vasileiadou K.; Vernadou E.; Obst M. (2025): ARMS-MBON data on long-term monitoring of hard-bottom communities: COI results from 2020-2022. https://marineinfo.org/doc/dataset/8922
Contact:
Obst, Matthias ;
Also accessible through: Availability:
 This dataset is licensed under a Creative Commons Attribution 4.0 International License.Description
ARMS-MBON is a network of more than 25 partners who deploy Autonomous Reef Monitoring Structures (ARMS) settlement units in the vicinity of marine stations and Long-term Ecological Research sites in European coastal waters and Ant/arctica. After a few months the units are brought up, and visual, photographic, and genetic assessments are made of the lifeforms that settled on them. The collected data are published (see the related datasets and GitHub links listed in this record) and the omics data analysed. In this record we include the outputs of our analysis of the COI data from the 2020-2022 campaign. The analysis used the PEMA bioinformatics software, and the resulting taxonomics inventory has been turned into DwC format. In addition, all the PEMA inputs and outputs can be found on the ARMS-MBON GitHub site (see links in this record), and the subset of the sampling data to which these COI results are linked can also be found on the ARMS-MBON GitHub site. Lineage
Prior to publication data undergo quality control checked which are described in https://github.com/EMODnet/EMODnetBiocheck?tab=readme-ov-file#understanding-the-output Scope Themes: Biology > Benthos Keywords: Marine/Coastal · ASSEMBLEPlus Joint Research Activity 1 · Benthic communities · Benthic regions · Biodiversity · Bio-geographical regions · Biota · DNA barcoding · Environment · Genome analysis · Geoscientific Information · Habitats and biotopes · Invasive species · Long-term records · Metadata non conformant · Metadata not evaluated · No limitations to public access · Oceans · Sea regions · Species diversity · WGS84 (EPSG:4326) · XYZ ASCII · 13E1 · 17G2 · 42F9 · 43G2 · 44G1 · 45G1 · Abra de Bilbao · Belgian part of the North Sea · Crete Island · Kilkieran Bay and Islands · Kosterfjorden-Väderöfjorden · Plymouth Sound · Tammisaaren Ja Hangon Saariston Ja Pohjanpitäjänlahden Merensuojelualue · The Sound · Entoprocta · Acantharia · Acanthocephala · Acavomonas peruviana Tikhonenkov, Janouškovec, Mylnikov, Mikhailov, Simdyanov, Aleoshin & P.J.Keeling, 2014 · Ahnfeltia plicata (Hudson) E.M.Fries, 1836 · Allotriocarida · Amphilochidea · Annelida incertae sedis · Anthoathecata · Aphroditiformia · Apicomplexa · Ascidiacea · Asteriidae Gray, 1840 · Bacillariophycanae · Bacillariophyta · Bangiaceae Duby, 1830 · Bathylepeta linseae Schwabe, 2006 · Batoidea · Bigyra · Caenogastropoda · Calanoida · Cercozoa · Chattonellales · Chelicerata · Chilognatha · Chlorarachnion reptans Geitler, 1930 · Chlorodendraceae Oltmanns, 1904 · Chloroparvula Lopes dos Santos, Noël & Eikrem, 2017 · Chlorophyceae · Chloropicon Lopes dos Santos & Eikrem, 2017 · Chromadoria · Chromera velia R.B.Moore et al., 2008 · Chrysoparadoxa australica Wetherbee, 2018 · Chrysophyceae · Cirratuliformia · Clitellata · Comatulida · Corallinophycidae · Coscinodiscophycidae · Craniscus japonicus (Adams, 1863) · Cryptonome barbada Barroso, Kudenov, Halanych, Saeedi, Sumida & Bernardino, 2018 · Ctenostomatida · Cyanidiophyceae · Cycloneritida · Cyclostomatida · Decapodiformes · Delphineis G.W. Andrews, 1977 · Dictyochophyceae · Dicyema clavatum Furuya & Koshida, 1992 · Dinophyceae · Echinoderes svetlanae Adrianov, 1999 in Adrianov & Malakhov, 1999 · Echinozoa · Enoplea · Enteromyxum Palenzuela, Redondo & Alvarez-Pellitero, 2002 · Euheterodonta · Eunicida · Eunotia C.G. Ehrenberg, 1837 · Euryophiurida · Eustigmatophyceae · Flustrina · Foraminifera · Fragilariophycanae · Fungi · Gastrotricha · Gennadas parvus Spence Bate, 1881 · Glaucocystaceae G.S.West · Glycera fallax Quatrefages, 1850 · Golfingia vulgaris (de Blainville, 1827) · Hacrobia · Haliclystidae Haeckel, 1879 · Halicryptus von Siebold, 1849 · Haptoria · Hemichordata · Heteroscleromorpha · Hexacorallia · Homosclerophorida · Iphiteon panicea Bowerbank, 1869 · Isopoda · Keratosa · Khakista · Leptothecata · Leucosolenia complicata (Montagu, 1814) · Meganyctiphanes norvegica (M. Sars, 1857) · Membraniporoidea Busk, 1854 · Mysidae Haworth, 1825 · Nemaliophycidae · Nemertea · Neoloricata · Nephtyidae Grube, 1850 · Nereidiformia · Nudipleura · Octocorallia · Oligostraca · Oligotrichia · Oomycota · Ophintegrida · Opisthokonta · Pedinophyceae · Perkinsus qugwadi Blackbourn, Bower & Meyer, 1998 · Petrachloros mirabilis F.Soares, Trovão & Portugal, 2022 · Phaeophyceae · Phyllodocidae Örsted, 1843 · Picozoa · Pleocyemata · Ploima · Podoplea · Polychaeta incertae sedis · Polyplacotoma mediterranea Osigus & Schierwater, 2019 · Postciliodesmatophora · Prasinoderma coloniale T.Hasegawa & Chihara, 1996 · Prasinophytina · Primno brevidens Bowman, 1978 · Proneomenia sluiteri Hubrecht, 1880 · Proteorhodophytina · Protozoa · Pteriomorphia · Pterocladiophila hemisphaerica K.C.Fan & Papenfuss, 1959 · Pupa strigosa (A. A. Gould, 1859) · Rhabditophora · Rhodymeniophycidae · Ringiculopsis foveolata (Yokoyama, 1928) · Sabellaria spinulosa (Leuckart, 1849) · Sabellida · Sarcinochrysidales · Schizonema C.A. Agardh, 1824 · Scolecida · Semaeostomeae · Senticaudata · Siphonophorae · Spionidae Grube, 1850 · Spirotrichea · Streptophyta · Tardigrada · Tectipleura · Teleostei · Terebelliformia · Tetrapoda · Thecostraca · Trachylinae · Trebouxiophyceae · Tribonema Derbès & Solier, 1851 · Triparma laevis B.C.Booth, 1987 · Turbellaria · Ulvophyceae · Unionida · Ventrata · Verongimorpha · Vetigastropoda · Xenacoelomorpha Geographical coverage 13E1 [Marine Regions] 17G2 [Marine Regions] 42F9 [Marine Regions] 43G2 [Marine Regions] 44G1 [Marine Regions] 45G1 [Marine Regions] Abra de Bilbao [Marine Regions] Belgian part of the North Sea [Marine Regions] Crete Island [Marine Regions] Kilkieran Bay and Islands [Marine Regions] Kosterfjorden-Väderöfjorden [Marine Regions] Plymouth Sound [Marine Regions] Tammisaaren Ja Hangon Saariston Ja Pohjanpitäjänlahden Merensuojelualue [Marine Regions] The Sound [Marine Regions] Temporal coverage
31 January 2020 - 15 November 2021 Taxonomic coverage
Entoprocta [WoRMS]
Acantharia [WoRMS]
Acanthocephala [WoRMS]
Acavomonas peruviana Tikhonenkov, Janouškovec, Mylnikov, Mikhailov, Simdyanov, Aleoshin & P.J.Keeling, 2014 [WoRMS]
Ahnfeltia plicata (Hudson) E.M.Fries, 1836 [WoRMS]
Allotriocarida [WoRMS]
Amphilochidea [WoRMS]
Annelida incertae sedis [WoRMS]
Anthoathecata [WoRMS]
Aphroditiformia [WoRMS]
Apicomplexa [WoRMS]
Ascidiacea [WoRMS]
Asteriidae Gray, 1840 [WoRMS]
Bacillariophycanae [WoRMS]
Bacillariophyta [WoRMS]
Bangiaceae Duby, 1830 [WoRMS]
Bathylepeta linseae Schwabe, 2006 [WoRMS]
Batoidea [WoRMS]
Bigyra [WoRMS]
Caenogastropoda [WoRMS]
Calanoida [WoRMS]
Cercozoa [WoRMS]
Chattonellales [WoRMS]
Chelicerata [WoRMS]
Chilognatha [WoRMS]
Chlorarachnion reptans Geitler, 1930 [WoRMS]
Chlorodendraceae Oltmanns, 1904 [WoRMS]
Chloroparvula Lopes dos Santos, Noël & Eikrem, 2017 [WoRMS]
Chlorophyceae [WoRMS]
Chloropicon Lopes dos Santos & Eikrem, 2017 [WoRMS]
Chromadoria [WoRMS]
Chromera velia R.B.Moore et al., 2008 [WoRMS]
Chrysoparadoxa australica Wetherbee, 2018 [WoRMS]
Chrysophyceae [WoRMS]
Cirratuliformia [WoRMS]
Clitellata [WoRMS]
Comatulida [WoRMS]
Corallinophycidae [WoRMS]
Coscinodiscophycidae [WoRMS]
Craniscus japonicus (Adams, 1863) [WoRMS]
Cryptonome barbada Barroso, Kudenov, Halanych, Saeedi, Sumida & Bernardino, 2018 [WoRMS]
Ctenostomatida [WoRMS]
Cyanidiophyceae [WoRMS]
Cycloneritida [WoRMS]
Cyclostomatida [WoRMS]
Decapodiformes [WoRMS]
Delphineis G.W. Andrews, 1977 [WoRMS]
Dictyochophyceae [WoRMS]
Dicyema clavatum Furuya & Koshida, 1992 [WoRMS]
Dinophyceae [WoRMS]
Echinoderes svetlanae Adrianov, 1999 in Adrianov & Malakhov, 1999 [WoRMS]
Echinozoa [WoRMS]
Enoplea [WoRMS]
Enteromyxum Palenzuela, Redondo & Alvarez-Pellitero, 2002 [WoRMS]
Euheterodonta [WoRMS]
Eunicida [WoRMS]
Eunotia C.G. Ehrenberg, 1837 [WoRMS]
Euryophiurida [WoRMS]
Eustigmatophyceae [WoRMS]
Flustrina [WoRMS]
Foraminifera [WoRMS]
Fragilariophycanae [WoRMS]
Fungi [WoRMS]
Gastrotricha [WoRMS]
Gennadas parvus Spence Bate, 1881 [WoRMS]
Glaucocystaceae G.S.West [WoRMS]
Glycera fallax Quatrefages, 1850 [WoRMS]
Golfingia vulgaris (de Blainville, 1827) [WoRMS]
Hacrobia [WoRMS]
Haliclystidae Haeckel, 1879 [WoRMS]
Halicryptus von Siebold, 1849 [WoRMS]
Haptoria [WoRMS]
Hemichordata [WoRMS]
Heteroscleromorpha [WoRMS]
Hexacorallia [WoRMS]
Homosclerophorida [WoRMS]
Iphiteon panicea Bowerbank, 1869 [WoRMS]
Isopoda [WoRMS]
Keratosa [WoRMS]
Khakista [WoRMS]
Leptothecata [WoRMS]
Leucosolenia complicata (Montagu, 1814) [WoRMS]
Meganyctiphanes norvegica (M. Sars, 1857) [WoRMS]
Membraniporoidea Busk, 1854 [WoRMS]
Mysidae Haworth, 1825 [WoRMS]
Nemaliophycidae [WoRMS]
Nemertea [WoRMS]
Neoloricata [WoRMS]
Nephtyidae Grube, 1850 [WoRMS]
Nereidiformia [WoRMS]
Nudipleura [WoRMS]
Octocorallia [WoRMS]
Oligostraca [WoRMS]
Oligotrichia [WoRMS]
Oomycota [WoRMS]
Ophintegrida [WoRMS]
Opisthokonta [WoRMS]
Pedinophyceae [WoRMS]
Perkinsus qugwadi Blackbourn, Bower & Meyer, 1998 [WoRMS]
Petrachloros mirabilis F.Soares, Trovão & Portugal, 2022 [WoRMS]
Phaeophyceae [WoRMS]
Phyllodocidae Örsted, 1843 [WoRMS]
Picozoa [WoRMS]
Pleocyemata [WoRMS]
Ploima [WoRMS]
Podoplea [WoRMS]
Polychaeta incertae sedis [WoRMS]
Polyplacotoma mediterranea Osigus & Schierwater, 2019 [WoRMS]
Postciliodesmatophora [WoRMS]
Prasinoderma coloniale T.Hasegawa & Chihara, 1996 [WoRMS]
Prasinophytina [WoRMS]
Primno brevidens Bowman, 1978 [WoRMS]
Proneomenia sluiteri Hubrecht, 1880 [WoRMS]
Proteorhodophytina [WoRMS]
Protozoa [WoRMS]
Pteriomorphia [WoRMS]
Pterocladiophila hemisphaerica K.C.Fan & Papenfuss, 1959 [WoRMS]
Pupa strigosa (A. A. Gould, 1859) [WoRMS]
Rhabditophora [WoRMS]
Rhodymeniophycidae [WoRMS]
Ringiculopsis foveolata (Yokoyama, 1928) [WoRMS]
Sabellaria spinulosa (Leuckart, 1849) [WoRMS]
Sabellida [WoRMS]
Sarcinochrysidales [WoRMS]
Schizonema C.A. Agardh, 1824 [WoRMS]
Scolecida [WoRMS]
Semaeostomeae [WoRMS]
Senticaudata [WoRMS]
Siphonophorae [WoRMS]
Spionidae Grube, 1850 [WoRMS]
Spirotrichea [WoRMS]
Streptophyta [WoRMS]
Tardigrada [WoRMS]
Tectipleura [WoRMS]
Teleostei [WoRMS]
Terebelliformia [WoRMS]
Tetrapoda [WoRMS]
Thecostraca [WoRMS]
Trachylinae [WoRMS]
Trebouxiophyceae [WoRMS]
Tribonema Derbès & Solier, 1851 [WoRMS]
Triparma laevis B.C.Booth, 1987 [WoRMS]
Turbellaria [WoRMS]
Ulvophyceae [WoRMS]
Unionida [WoRMS]
Ventrata [WoRMS]
Verongimorpha [WoRMS]
Vetigastropoda [WoRMS]
Xenacoelomorpha [WoRMS]
Contributors
University of Gothenburg; Faculty of Science; Department of Marine Sciences, more, data creator, data owner
European Marine Biological Research Centre (EMBRC-ERIC), more, data creator
Hellenic Centre for Marine Research; Institute of Marine Biology, Biotechnology and Aquaculture (IMBCC), more, data creator, data collector, data manager
Vlaams Instituut voor de Zee (VLIZ), more, data manager, data collector
University of the Basque country; Plentzia Marine Station (PiE-UPV/EHU), more, data collector
University of Vigo; Departamento de Ecología y Biología Animal; Station of marine Science of Toralla (ECIMAT), more, data collector
University of Vigo; Ecology and Animal Biology Department; Facultad de Ciencias do Mar; Grupo de Investigación en Ecología Costera (EcoCost), more, data collector
National Institute of Biology; Marine Biological Station Piran (MBS), more, data collector
University of Helsinki; Tvärminne Zoological Station (TZS), more, data collector
University of Aarhus; Faculty of Technical Sciences; Department of Ecoscience, more, data collector
Marine Biological Association of the UK (MBA), more, data collector
University of Bologna; Department of Biological, Geological and Environmental Sciences (BIGEA), more, data collector
Related datasets
Project
ASSEMBLE+: Association of European Marine Biological Laboratories Expanded, more
Funding Horizon Europe
Grant agreement ID 730984
Publication
Based on this dataset
Obst, M. et al. (2020). A Marine Biodiversity Observation Network for genetic monitoring of hard-bottom communities (ARMS-MBON). Front. Mar. Sci. 7: 572680. https://dx.doi.org/10.3389/fmars.2020.572680, more
URLs
Dataset information: Other: Data type: Data
Data origin: Monitoring: field survey
Release date: 2025-09-15
Metadatarecord created: 2025-09-16
Information last updated: 2026-01-26
| ||||
