Trophos

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prof. dr. ir. Swings, Jean
ORCID

Projecten (7)

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Biodegradeerbaarheid van bioplastics,; prenormatief onderzoek, biorecyclage en ecologische impact
Biodiversiteit van microbiële matten in Antarctica
Diagnose en beheersing van bakterieziekten in penaeide garnalen ontluikingsbedrijven
Hygiene bewaking en ziektevoorkoming in mariene viskultuur, vnl. door aanpassing en beheersing van de mikrobiologische omgeving
Improvement of scallop (Mollusca) production in rural areas
Larvicultuur van de tarbot (Scophthalmus maximus): Zoötechnische, pathologische en microbiologische aspecten
Prokaryotische diversiteit in poolzeeën en Antarctische meren

Publicaties (104)	Top \| Publicaties \| Projecten
A1 publicaties (75) [show]
Walter, J.M.; de Oliveira, L.S.; Tschoeke, D.A.; Meirelles, P.M.; Neves, M.H.C.B.; Batista, D.; Carvalho, A.P.; Dos Santos Costa, R.; Dobretsov, S.; Coutinho, R.; Swings, J.; Thompson, C.C.; Thompson, F.L. (2021). Metagenomic insights into ecosystem function in the microbial mats of a large hypersaline coastal lagoon system. Front. Mar. Sci. 8: 715335. https://dx.doi.org/10.3389/fmars.2021.715335 Salazar, V.W.; Tschoeke, D.A.; Swings, J.; Cosenza, C.A.; Mattoso, M.; Thompson, C.C.; Thompson, F.L. (2020). A new genomic taxonomy system for the Synechococcus collective. Environ. Microbiol. 22(11): 4557-4570. https://hdl.handle.net/10.1111/1462-2920.15173 Tschoeke, D.; Salazar, V.W.; Vidal, L.; Campeão, M.; Swings, J.; Thompson, F.; Thompson, C. (2020). Unlocking the genomic taxonomy of the Prochlorococcus collective. Microb. Ecol. 80(3): 546-558. https://hdl.handle.net/10.1007/s00248-020-01526-5 Campeão, M.E.; Swings, J.; Silva, B.S.; Otsuki, K.; Thompson, F.L.; Thompson, C.C. (2019). “Candidatus Colwellia aromaticivorans” sp. nov., “Candidatus Halocyntiibacter alkanivorans” sp. nov., and “Candidatus Ulvibacter alkanivorans” sp. nov. genome sequences. Microbiology Resource Announcements 8(15): e00086-19. https://dx.doi.org/10.1128/MRA.00086-19 Walter, J.M.; Coutinho, F.H.; Dutilh, B.E.; Swings, J.; Thompson, F.L.; Thompson, C. (2017). Ecogenomics and taxonomy of Cyanobacteria phylum. Front. Microbiol. 8: 2132. https://dx.doi.org/10.3389/fmicb.2017.02132 Appolinario, L.; Tschoeke, D.; Rua, C.; Venas, T.; Campeao, M.; Amaral, G.; Leomil, L.; de Oliveira, L.; Vieira, V.; Otsuki, K.; Swings, J.; Thompson, F.; Thompson, C. (2016). Description of Endozoicomonas arenosclerae sp. nov. using a genomic taxonomy approach. Antonie van Leeuwenhoek 109(3): 431-438. https://dx.doi.org/10.1007/s10482-016-0649-x Meirelles, P.M.; Gadelha, L.M.R.; Francini-Filho, R.B.; de Moura, R.L.; Amado-Filho, G.M.; Bastos, A.C.; Paranhos, R.P.R.; Rezende, C.E.; Swings, J.; Siegle, E.; Asp Neto, N.E.; Leitão, S.N.; Coutinho, R.; Mattoso, M.; Salomon, P.S.; Valle, R.A.B.; Pereira, R.C.; Kruger, R.H.; Thompson, C.; Thompson, F.L. (2015). BaMBa: towards the integrated management of Brazilian marine environmental data. Database 2015: bav088. https://dx.doi.org/10.1093/database/bav088 Moreira, B; Duytschaever, G; Tonon, C; Froes, M; de Oliveira, S; Amado, M; Francini, B; De Vos, P.; Swings, J.; Thompson, C; Thompson, L (2014). Photobacterium sanctipauli sp. nov. isolated from bleached Madracis decactis (Scleractinia) in the St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil. PeerJ 2: e427. dx.doi.org/10.7717/peerj.427 Rojas, J.L.; Martin, J.; Tormo, J.R.; Vicente, F.; Brunati, M.; Ciciliato, I.; Losi, D.; Van Trappen, S.; Mergaert, J.; Swings, J.; Marinelli, F.; Genilloud, O. (2009). Bacterial diversity from benthic mats of Antarctic lakes as a source of new bioactive metabolites. Marine Genomics 2(1): 33-41. dx.doi.org/10.1016/j.margen.2009.03.005 Hidalgo, R.; Cleenwerck, I.; Balboa, S.; De Wachter, M.; Thompson, F.; Swings, J.; de Vos, P.; Romalde, J. (2008). Diversity of Vibrios associated with reared clams in Galicia (NW Spain). Syst. Appl. Microbiol. 31(3): 215-222. https://dx.doi.org/10.1016/j.syapm.2008.04.001 Thompson, F.L.; Cleenwerck, I.; Swings, J.; Matsuyama, J.; Iida, T. (2007). Genomic diversity and homologous recombination in Vibrio parahaemolyticus as revealed by amplified fragment length polymorphism (AFLP) and multilocus sequence analysis (MLSA). Microbes and Environments 22(4): 373-379. dx.doi.org/10.1264/jsme2.22.373 Tryfinopoulou, P.; Tsakalidou, E.; Vancanneyt, M.; Hoste, B.; Swings, J.; Nychas, G-J.E (2007). Diversity of Shewanella population in fish Sparus aurata harvested in the Aegean Sea. J. Appl. Microbiol. 103(3): 711-721. dx.doi.org/10.1111/j.1365-2672.2007.03355.x De Mesel, I.G.; Derycke, S.; Swings, J.; Vincx, M.; Moens, T. (2006). Role of nematodes in decomposition processes: does within-trophic group diversity matter? Mar. Ecol. Prog. Ser. 321: 157-166. dx.doi.org/10.3354/meps321157 Nedashkovskaya, O.I.; Vancanneyt, M.; Christiaens, L.; Kalinovskaya, N.I.; Mikhailov, V.; Swings, J. (2006). Aquimarina intermedia sp. nov., reclassification of Stanierella latercula (Lewin 1969) as Aquimarina latercula comb. nov. and Gaetbulimicrobium brevivitae Yoon et al. 2006 as Aquimarina brevivitae comb. nov. and emended description of the genus Aquimarina. Int. J. Syst. Evol. Microbiol. 56: 2037-2041. dx.doi.org/10.1099/ijs.0.64155-0 Nedashkovskaya, O.I.; Kim, S.B.; Vancanneyt, M.; Lysenko, A.M.; Shin, D.S.; Park, M.S.; Lee, K.H.; Jung, W.J.; Kalinovskaya, N.I.; Mikhailov, V.; Bae, K.S.; Swings, J. (2006). Echinicola pacifica gen. nov., sp nov., a novel flexibacterium isolated from the sea urchin Strongylocentrotus intermedius. Int. J. Syst. Evol. Microbiol. 56: 953-958. dx.doi.org/10.1099/ijs.0.64156-0 Nedashkovskaya, O.I.; Kim, S.B.; Vancanneyt, M.; Shin, D.S.; Lysenko, A.M.; Shevchenko, L.S.; Krasokhin, V.B.; Mikhailov, V.; Swings, J.; Bae, K.S. (2006). Salegentibacter agarivorans sp. nov., a novel marine bacterium of the family Flavobacteriaceae isolated from the sponge Artemisina sp. Int. J. Syst. Evol. Microbiol. 56: 883-887. dx.doi.org/10.1099/ijs.0.64167-0 Nedashkovskaya, O.I.; Vancanneyt, M.; Cleenwerck, I.; Snauwaert, C.; Kim, S.B.; Lysenko, A.M.; Shevchenko, L.S.; Lee, K.H.; Park, M.S.; Frolova, G.M.; Mikhailov, V.; Bae, K.S.; Swings, J. (2006). Arenibacter palladensis sp. nov., a novel marine bacterium isolated from the green alga Ulva fenestrata, and emended description of the genus Arenibacter. Int. J. Syst. Evol. Microbiol. 56: 155-160. dx.doi.org/10.1099/ijs.0.63893-0 Nedashkovskaya, O.I.; Kim, S.B.; Vancanneyt, M.; Snauwaert, C.; Lysenko, A.M.; Rohde, M.; Frolova, G.M.; Zhukova, N.V.; Mikhailov, V.; Bae, K.S.; Oh, H.W.; Swings, J. (2006). Formosa agariphila sp. nov., a budding bacterium of the family Flavobacteriaceae isolated from marine environments, and emended description of the genus Formosa. Int. J. Syst. Evol. Microbiol. 56: 161-167. dx.doi.org/10.1099/ijs.0.63875-0 Thompson, F.L.; Barash, Y.; Sawabe, T.; Sharon, G.; Swings, J.; Rosenberg, E. (2006). Thalassomonas loyana sp. nov., a causative agent of the white plague-like disease of corals on the Eilat coral reef. Int. J. Syst. Evol. Microbiol. 56: 365-368. dx.doi.org/10.1099/ijs.0.63800-0 Austin, B.; Austin, D.; Sutherland, R.; Thompson, F.; Swings, J. (2005). Pathogenicity of vibrios to rainbow trout (Oncorhynchus mykiss, Walbaum) and Artemia nauplii. Environ. Microbiol. 7(9): 1488-1495. dx.doi.org/10.1111/j.1462-2920.2005.00847.x Laursen, B.G.; Bay, L.; Cleenwerck, I.; Vancanneyt, M.; Swings, J.; Dalgaard, P.; Leisner, J. (2005). Carnobacterium divergens and Carnobacterium maltaromaticum as spoilers or protective cultures in meat and seafood: phenotypic and genotypic characterization. Syst. Appl. Microbiol. 28(2): 151-164. https://dx.doi.org/10.1016/j.syapm.2004.12.001 Le Roux, F.; Goubet, A.; Thompson, F.L.; Faury, N.; Gay, M.; Swings, J.; Saulnier, D. (2005). Vibrio gigantis sp. nov., isolated from the haemolymph of cultured oysters (Crassostrea gigas). Int. J. Syst. Evol. Microbiol. 55: 2251-2255. dx.doi.org/10.1099/ijs.0.63666-0 Moens, T.; Paiva dos Santos, G.A.; Thompson, F.L.; Swings, J.; Fonséca-Genevois, V.; Vincx, M.; De Mesel, I.G. (2005). Do nematode mucus secretions affect bacterial growth? Aquat. Microb. Ecol. 40(1): 77-83. dx.doi.org/10.3354/ame040077 Nedashkovskaya, O.I.; Vancanneyt, M.; Dawyndt, P.; Engelbeen, K.; Vandemeulebroecke, K.; Cleenwerck, I.; Hoste, B.; Mergaert, J.; Tan, T.-L.; Frolova, G.M.; Mikhailov, V.; Swings, J. (2005). Reclassification of [Cytophaga] marinoflava Relchenbach 1989 as Leeuwenhoekiella marinoflava gen. nov., comb. nov. and description of Leeuwenhoekiella aequorea sp. nov. Int. J. Syst. Evol. Microbiol. 55: 1033-1038. dx.doi.org/10.1099/ijs.0.63410-0 Nedashkovskaya, O.I.; Kim, S.B.; Han, S.K.; Snauwaert, C.; Vancanneyt, M.; Swings, J.; Kim, K.-O.; Lysenko, A.M.; Rohde, M.; Frolova, G.M.; Mikhailov, V.; Bae, K.S. (2005). Winogradskyella thalassocola gen. nov., sp. nov., Winogradskyella epiphytica sp. nov. and Winogradskyella eximia sp. nov., marine bacteria of the family Flavobactefiaceae. Int. J. Syst. Evol. Microbiol. 55: 49-55. dx.doi.org/10.1099/ijs.0.63307-0 Svec, P.; Vancanneyt, M.; Devriese, L.A.; Naser, S.M.; Snauwaert, C.; Lefebvre, K.; Hoste, B.; Swings, J. (2005). Enterococcus aquimarinus sp. nov., isolated from sea water. Int. J. Syst. Evol. Microbiol. 55: 2183-2187. dx.doi.org/10.1099/ijs.0.63722-0 Thompson, F.L.; Gevers, D.; Thompson, C.C.; Dawyndt, P.; Naser, S.; Hoste, B.; Munn, C.B.; Swings, J. (2005). Phylogeny and molecular identification of vibrios on the basis of multilocus sequence analysis. Appl. Environ. Microbiol. 71(9): 5107-5115. dx.doi.org/10.1128/AEM.71.9.5107-5115.2005 Thompson, F.L.; Thompson, C.C.; Naser, S.; Hoste, B.; Vandemeulebroecke, K.; Munn, C.; Bourne, D.; Swings, J. (2005). Photobacterium rosenbergii sp. nov. and Enterovibrio coralii sp. nov., vibrios associated with coral bleaching. Int. J. Syst. Evol. Microbiol. 55: 913-917. dx.doi.org/10.1099/ijs.0.63370-0 Abraham, W.-R.; Strömpl, C.; Vancanneyt, M.; Bennasar, A.; Swings, J.; Lünsdorf, H.; Smit, J.; Moore, E.R.B. (2004). Woodsholea maritima gen. nov., sp nov., a marine bacterium with a low diversity of polar lipids. Int. J. Syst. Evol. Microbiol. 54: 1227-1234. dx.doi.org/10.1099/ijs.0.02943-0 De Mesel, I.G.; Derycke, S.; Moens, T.; Van der Gucht, K.; Vincx, M.; Swings, J. (2004). Top-down impact of bacterivorous nematodes on the bacterial community structure: a microcosm study. Environ. Microbiol. 6(7): 733-744. http://dx.doi.org/10.1111/j.1462-2920.2004.00610.x Faury, N.; Saulnier, D.; Thompson, F.L.; Gay, M.; Swings, J.; Le Roux, F. (2004). Vibrio crassostreae sp. nov., isolated from the haemolymph of oysters (Crassostrea gigas). Int. J. Syst. Evol. Microbiol. 54: 2137-2140. dx.doi.org/10.1099/ijs.0.63232-0 Gomez-Gil, B.; Thompson, F.L.; Thompson, C.C.; Garcia-Gasca, A.; Roque, A.; Swings, J. (2004). Vibrio hispanicus sp. nov., isolated from Artemia sp. and sea water in Spain. Int. J. Syst. Evol. Microbiol. 54: 261-265. dx.doi.org/10.1099/ijs.0.02775-0 Nedashkovskaya, O.I.; Suzuki, M.; Lysenko, A.M.; Snauwaert, C.; Vancanneyt, M.; Swings, J.; Vysotskii, M.V.; Mikhailov, V. (2004). Cellullophaga pacifica sp. nov. Int. J. Syst. Evol. Microbiol. 54: 609-613. dx.doi.org/10.1099/ijs.0.02737-0 Nedashkovskaya, O.I.; Suzuki, M.; Vancanneyt, M.; Cleenwerck, I.; Lysenko, A.M.; Mikhailov, V.; Swings, J. (2004). Zobellia amurskyensis sp. nov., Zobellia laminariae sp. nov. and Zobellia russellii sp. nov., novel marine bacteria of the family Flavobactenaceae. Int. J. Syst. Evol. Microbiol. 54: 1643-1648. dx.doi.org/10.1099/ijs.0.63091-0 Nedashkovskaya, O.I.; Vancanneyt, M.; Van Trappen, S.; Vandemeulebroecke, K.; Lysenko, A.M.; Rohde, M.; Falsen, E.; Frolova, G.M.; Mikhailov, V.; Swings, J. (2004). Description of Algoriphagus aquimarinus sp. nov., Algoriphagus chordae sp. nov. and Algoriphagus winogradskyi sp. nov., from sea water and algae, transfer of Hongiella halophile Yi and Chun 2004 to the genus Algoriphagus as Algoriphagus halophilus comb. nov. and emended descriptions of the genera Algoriphagus Bowman et al. 2003 and Hongiella Yi and Chun 2004. Int. J. Syst. Evol. Microbiol. 54: 1757-1764. dx.doi.org/10.1099/ijs.0.02915-0 Nedashkovskaya, O.I.; Suzuki, M.; Vancanneyt, M.; Cleenwerck, I.; Zhukova, N.V.; Vysotskii, M.V.; Mikhailov, V.; Swings, J. (2004). Salegentibacter holothuriorum sp. nov., isolated from the edible holothurian Apostichopus japonicus. Int. J. Syst. Evol. Microbiol. 54: 1107-1110. dx.doi.org/10.1099/ijs.0.02987-0 Sawabe, T.; Hayashi, K.; Moriwaki, J.; Fukui, Y.; Thompson, F.L.; Swings, J.; Christen, R. (2004). Vibrio neonatus sp. nov. and Vibrio ezurae sp. nov. Isolated from the Gut of Japanese Abalones. Syst. Appl. Microbiol. 27(5): 527-534. https://dx.doi.org/10.1078/0723202041748154 Sawabe, T.; Hayashi, K.; Moriwaki, J.; Thompson, F.L.; Swings, J.; Potin, P.; Christen, R.; Ezura, Y. (2004). Vibrio gallicus sp. nov., isolated from the gut of the French abalone Haliotis tuberculata. Int. J. Syst. Evol. Microbiol. 54: 843-846. dx.doi.org/10.1099/ijs.0.02804-0 Thompson, F.L.; Iida, T.; Swings, J. (2004). Biodiversity of Vibrios. Microbiol. Mol. Biol. Rev. 68(3): 403-431. http://dx.doi.org/10.1128/MMBR.68.3.403-431.2004 Van Trappen, S.; Tan, T.-L.; Yang, J.; Mergaert, J.; Swings, J. (2004). Alteromonas stellipolaris sp. nov., a novel, budding, prosthecate bacterium from Antarctic seas, and emended description of the genus Alteromonas. Int. J. Syst. Evol. Microbiol. 54: 1157-1163. dx.doi.org/10.1099/ijs.0.02862-0 Van Trappen, S.; Tan, T.-L.; Yang, J.; Mergaert, J.; Swings, J. (2004). Glaciecola polaris sp. nov., a novel budding and prosthecate bacterium from the Arctic Ocean, and emended description of the genus Glaciecola. Int. J. Syst. Evol. Microbiol. 54: 1765-1771. dx.doi.org/10.1099/ijs.0.63123-0 Ben-Haim, Y.; Thompson, F.L.; Thompson, C.C.; Cnockaert, M.; Hoste, B.; Swings, J.; Rosenberg, E. (2003). Vibrio coralliilyticus sp. nov., a temperature-dependent pathogen of the coral Pocillopora damicornis. Int. J. Syst. Evol. Microbiol. 53(1): 309-315. http://dx.doi.org/10.1099/ijs.0.02402-0 Berry, A.; Janssens, D.; Hümbelin, M.; Jore, J.P.M.; Hoste, B.; Cleenwerck, I.; Vancanneyt, M.; Bretzel, W.; Mayer, A.F.; Lopez-Ulibarri, R.; Shanmugam, B.; Swings, J.; Pasamontes, L. (2003). Paracoccus zeaxanthinifaciens sp. nov., a zeaxanthin-producing bacterium. Int. J. Syst. Evol. Microbiol. 53: 231-238. dx.doi.org/10.1099/ijs.0.02368-0 De Mesel, I.G.; Derycke, S.; Swings, J.; Vincx, M.; Moens, T. (2003). Influence of bacterivorous nematodes on the decomposition of cordgrass. J. Exp. Mar. Biol. Ecol. 296(2): 227-242. https://dx.doi.org/10.1016/s0022-0981(03)00338-1 Godoy, F.; Vancanneyt, M.; Martinez, M.; Steinbuchel, A.; Swings, J.; Rehm, B.H.A. (2003). Sphingopyxis chilensis sp. nov., a chlorophenol-degrading bacterium that accumulates polyhydroxyalkanoate, and transfer of Sphingomonas alaskensis to Sphingopyxis alaskensis comb. nov. Int. J. Syst. Evol. Microbiol. 53: 473-477. dx.doi.org/10.1099/ijs.0.02375-0 Gomez-Gil, B.; Thompson, F.L.; Thompson, C.C.; Swings, J. (2003). Vibrio rotiferianus sp. nov., isolated from cultures of the rotifer Brachionus plicatilis. Int. J. Syst. Evol. Microbiol. 53(1): 239-243. https://dx.doi.org/10.1099/ijs.0.02430-0 Hayashi, K.; Moriwaki, J.; Sawabe, T.; Thompson, F.L.; Swings, J.; Gudkovs, N.; Christen, R.; Ezura, Y. (2003). Vibrio superstes sp. nov., isolated from the gut of Australian abalones Haliotis laevigata and Haliotis rubra. Int. J. Syst. Evol. Microbiol. 53: 1813-1817. dx.doi.org/10.1099/ijs.0.02625-0 Thompson, F.L.; Hoste, B.; Vandemeulebroecke, K.; Swings, J. (2003). Reclassification of Vibrio hollisae as Grimontia hollisae gen. nov., comb. nov. Int. J. Syst. Evol. Microbiol. 53(5): 1615-1617. http://dx.doi.org/10.1099/ijs.0.02660-0 Thompson, F.L.; Thompson, C.C.; Hoste, B.; Vandemeulebroecke, K.; Gullian, M.; Swings, J. (2003). Vibrio fortis sp. nov. and Vibrio hepatarius sp. nov., isolated from aquatic animals and the marine environment. Int. J. Syst. Evol. Microbiol. 53(5): 1495-1501. https://dx.doi.org/10.1099/ijs.0.02658-0 Thompson, F.L.; Thompson, C.C.; Li, Y.; Gomez-Gil, B.; Vandenberghe, J.; Hoste, B.; Swings, J. (2003). Vibrio kanaloae sp. nov., Vibrio pomeroyi sp. nov. and Vibrio chagasii sp. nov., from sea water and marine animals. Int. J. Syst. Evol. Microbiol. 53(1): 753-759. https://dx.doi.org/10.1099/ijs.0.02490-0 Thompson, F.L.; Thompson, C.C.; Swings, J. (2003). Vibrio tasmaniensis sp. nov., isolated from Atlantic salmon (Salmo salar L.). Syst. Appl. Microbiol. 26(1): 65-69. https://dx.doi.org/10.1078/072320203322337326 Thompson, F.L.; Li, Y.; Gomez-Gil, B.; Thompson, C.C.; Hoste, B.; Vandemeulebroecke, K.; Rupp, G.S.; Pereira, A.; De Bem, M.M.; Sorgeloos, P.; Swings, J. (2003). Vibrio neptunius sp. nov., Vibrio brasiliensis sp. nov. and Vibrio xuii sp. nov., isolated from the marine aquaculture environment (bivalves, fish, rotifers and shrimps). Int. J. Syst. Evol. Microbiol. 53: 245-252. dx.doi.org/10.1099/ijs.0.02447-0 Vandenberghe, J.; Thompson, F.L.; Gomez-Gil, B.; Swings, J. (2003). Phenotypic diversity amongst Vibrio isolates from marine aquaculture systems. Aquaculture 219(1-4): 9-20. https://dx.doi.org/10.1016/s0044-8486(02)00312-5 Abraham, W.-R.; Strömpl, C.; Bennasar, A.; Vancanneyt, M.; Snauwaert, C.; Swings, J.; Smit, J.; Moore, E.R.B. (2002). Phylogeny of Maricaulis Abraham et al. 1999 and proposal of Maricaulis virginensis sp. nov., M. parjimensis sp. nov., M. washingtonensis sp. nov. and M. salignorans sp. nov. Int. J. Syst. Evol. Microbiol. 52: 2191-2201. dx.doi.org/10.1099/00207713-52-6-2191 Sawabe, T.; Thompson, F.L.; Heyrman, J.; Cnockaert, M.; Hayashi, K.; Tanaka, R.; Yoshimizu, M.; Hoste, B.; Swings, J.; Ezura, Y. (2002). Fluorescent amplified fragment length polymorphism and repetitive extragenic palindrome-PCR fingerprinting reveal host-specific genetic diversity of Vibrio halioticoli-like strains isolated from the gut of Japanese abalone. Appl. Environ. Microbiol. 68(8): 4140-4144. https://dx.doi.org/10.1128/AEM.68.8.4140-4144.2002 Thompson, F.L.; Hoste, B.; Vandemeulebroecke, K.; Engelbeen, K.; Denis, R.; Swings, J. (2002). Vibrio trachuri Iwamoto et al. 1995 is a junior synonym of Vibrio harveyi (Johnson and Shunk 1936) Baumann et al. 1981. Int. J. Syst. Evol. Microbiol. 52: 973-976. https://dx.doi.org/10.1099/00207713-52-3-973 Thompson, F.L.; Hoste, B.; Thompson, C.C.; Goris, J.; Gomez-Gil, B.; Huys, L.; de Vos, P.; Swings, J. (2002). Enterovibrio norvegicus gen. nov., sp. nov., isolated from the gut of turbot (Scophthalmus maximus) larvae: a new member of the family Vibrionaceae. Int. J. Syst. Evol. Microbiol. 52(6): 2015-2022. https://dx.doi.org/10.1099/00207713-52-6-2015 Huys, L.; Dhert, P.; Robles, R.; Ollevier, F.P.; Sorgeloos, P.; Swings, J. (2001). Search for beneficial bacterial strains for turbot (Scophthalmus maximus L.) larviculture. Aquaculture 193(1-2): 25-37. dx.doi.org/10.1016/S0044-8486(00)00474-9 Mergaert, J.; Verhelst, A.; Cnockaert, M.C.; Tan, T.-L.; Swings, J. (2001). Characterization of facultative oligotrophic bacteria from polar seas by analysis of their fatty acids and 16S rDNA sequences. Syst. Appl. Microbiol. 24(1): 98-107. https://dx.doi.org/10.1078/0723-2020-00012 Thompson, F.L.; Hoste, B.; Thompson, C.C.; Huys, G.; Swings, J. (2001). The coral bleaching Vibrio shiloi Kushmaro et al. 2001 is a later synonym of Vibrio mediterranei Pujalte and Garay 1986. Syst. Appl. Microbiol. 24(4): 516-519. https://dx.doi.org/10.1078/0723-2020-00065 Thompson, F.L.; Hoste, B.; Vandemeulebroecke, K.; Swings, J. (2001). Genomic diversity amongst Vibrio isolates from different sources determined by fluorescent amplified fragment length polymorphism. Syst. Appl. Microbiol. 24(4): 520-538. https://dx.doi.org/10.1078/0723-2020-00067 Vancanneyt, M.; Schut, F.; Snauwaert, C.; Goris, J.; Swings, J.; Gottschal, J.C. (2001). Sphingomonas alaskensis sp nov., a dominant bacterium from a marine oligotrophic environment. Int. J. Syst. Evol. Microbiol. 51: 73-80. https://hdl.handle.net/10.1099/00207713-51-1-73 Benediktsdóttir, E.; Verdonck, L.; Sproer, C.; Helgason, S.; Swings, J. (2000). Characterization of Vibrio viscosus and Vibrio wodanis isolated at different geographical locations: a proposal for reclassification of Vibrio viscosus as Moritella viscosa comb. nov. Int. J. Syst. Evol. Microbiol. 50: 479-488. https://dx.doi.org/10.1099/00207713-50-2-479 Neyts, K.; Huys, G.; Uyttendaele, M.; Swings, J.; Debevere, J. (2000). Incidence and identification of mesophilic Aeromonas spp. from retail foods. Letters in Applied Microbiology 31(5): 359-363. https://dx.doi.org/10.1046/j.1472-765x.2000.00828.x Moens, T.; Verbeeck, L.; de Mayer, A.; Swings, J.; Vincx, M. (1999). Selective attraction of marine bacterivorous nematodes to their bacterial food. Mar. Ecol. Prog. Ser. 176: 165-178 Vandenberghe, J.; Verdonck, L.; Robles-Arozarena, R.; Rivera, G.; Bolland, A.; Balladares, M.; Gomez-Gil, B.; Calderon, J.; Sorgeloos, P.; Swings, J. (1999). Vibrios associated with Litopenaeus vannamei larvae, postlarvae, broodstock, and hatchery probionts. Appl. Environ. Microbiol. 65(6): 2592-2597 Shiri Harzevili, A.R.; Van Duffel, H.; Dhert, Ph.; Swings, J.; Sorgeloos, P. (1998). Use of a potential probiotic Lactococcus lactis AR21 strain for the enhancement of growth in the rotifer Brachionus plicatilis (Müller). Aquac. Res. 29(6): 411-417. dx.doi.org/10.1046/j.1365-2109.1998.00217.x Vandenberghe, J.; Li, Y.; Verdonck, L.; Li, J.; Sorgeloos, P.; Xu, H.S.; Swings, J. (1998). Vibrios associated with Penaeus chinensis (Crustacea: Decapoda) larvae in Chinese shrimp hatcheries. Aquaculture 169: 121-132. https://dx.doi.org/10.1016/S0044-8486(98)00319-6 Arias, C.R.; Verdonck, L.; Swings, J.; Aznar, R.; Garay, E. (1997). A polyphasic approach to study the intraspecific diversity amongst Vibrio vulnificus isolates. Syst. Appl. Microbiol. 20(4): 622-633 Arias, C.R.; Verdonck, L.; Swings, J.; Garay, E.; Aznar, R. (1997). Intraspecific differentiation of Vibrio vulnificus biotypes by amplified fragment length polymorphism and ribotyping. Appl. Environ. Microbiol. 63(7): 2600-2606 Grisez, L.; Reyniers, J.; Verdonck, L.; Swings, J.; Ollevier, F. (1997). Dominant intestinal microflora of sea bream and sea bass larvae, from two hatcheries, during larval development. Aquaculture 155(1-4): 387-399. https://dx.doi.org/10.1016/S0044-8486(97)00113-0 Shiri Harzevili, A.R.; Van Duffel, H.; Defoort, T.; Dhert, P.; Sorgeloos, P.; Swings, J. (1997). The influence of a selected bacterial strain Vibrio anguillarum TR 27 on the growth rate of rotifers in different culture conditions. Aquacult. Int. 5(2): 183-188 Verdonck, L.; Grisez, L.; Sweetman, E.; Minkoff, G.; Sorgeloos, P.; Ollevier, F.P.; Swings, J. (1997). Vibrios associated with routine productions of Brachionus plicatilis. Aquaculture 149(3-4): 203-214. http://dx.doi.org/10.1016/S0044-8486(96)01451-2 Kühn, I.; Austin, B.; Austin, D.A.; Blanch, A.R.; Grimont, P.A.D.; Jofre, J.; Koblavi, S.; Larsen, J.L.; Möllby, R.; Pedersen, K.; Tiainen, T.; Verdonck, L.; Swings, J. (1996). Diversity of Vibrio anguillarum isolates from different geographical and biological habitats, determined by the use of a combination of eight different typing methods. Syst. Appl. Microbiol. 19(3): 442-450. http://dx.doi.org/10.1016/s0723-2020(96)80075-0 Verdonck, L.; Swings, J.; Kersters, K.; Dehasque, M.; Sorgeloos, P.; Léger, P. (1994). Variability of the microbial environment of rotifer Brachionus plicatilis and Artemia production systems. J. World Aquacult. Soc. 25(1): 55-59
Peer reviewed publicaties (3) [show]
Berrada, I.; Willems, A.; De Vos, P.; El Fahime, E.; Swings, J.; Bendaou, N.; Melloul, M.; Amar, M. (2012). Diversity of culturable moderately halophilic and halotolerant bacteria in a marsh and two salterns a protected ecosystem of Lower Loukkos (Morocco). Afr. J. Microbiol. Res. 6(10): 2419-2434. dx.doi.org/10.5897/AJMR-11-1490 Hisbi, D.; Vandenberghe, J.; Robles, R.; Verdonck, L.; Swings, J.; Sorgeloos, P. (2000). Characterisation of Vibrio and related bacteria associated with shrimp Penaeus monodon larvae in Indonesia. Asian Fish. Sci. 13: 57-64 Thyssen, A.; Van Eygen, S.; Hauben, L.; Goris, J.; Swings, J.; Ollevier, F.P. (2000). Application of AFLP for taxonomic and epidemiological studies of Photobacterium damselae subsp. piscicida. Int. J. Syst. Bacteriol. 50: 1013-1019
Boekhoofdstukken (25) [show]
De Mesel, I.G.; Derycke, I.; Swings, J.; Vincx, M.; Moens, T. (2004). Effect of nematode diversity on organic matter decomposition and the associated microbial community: a microcosm study, in: De Mesel, I.G. Nematoden geassocieerd met fytodetritus in schorren: kolonisatiepatronen en soort- en diversiteitsafhankelijke invloed op afbraakprocessen = Nematodes associated with phytodetritus in salt marshes: colonization patterns and species- and diversity related impacts on decomposition processes. pp. 53-79 De Mesel, I.G.; Derycke, S.; Moens, T.; Van der Gucht, K.; Vincx, M.; Swings, J. (2004). Top-down impact of bacterivorous nematodes on the bacterial community structure: a microcosm study, in: De Mesel, I.G. Nematoden geassocieerd met fytodetritus in schorren: kolonisatiepatronen en soort- en diversiteitsafhankelijke invloed op afbraakprocessen = Nematodes associated with phytodetritus in salt marshes: colonization patterns and species- and diversity related impacts on decomposition processes. pp. 32-52 Ben-Haim, Y.; Thompson, F.L.; Thompson, C.C.; Cnockaert, M.; Hoste, B.; Swings, J.; Rosenberg, E. (2003). Vibrio coralliilyticus sp. nov., a temperature-dependent pathogen of the coral Pocillopora damicornis, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 135-145 De Mesel, I.G.; Derycke, S.; Swings, J.; Vincx, M.; Moens, T. (2003). Influence of bacterivorous nematodes on the decomposition of cordgrass, in: De Mesel, I.G. (2004). Nematoden geassocieerd met fytodetritus in schorren: kolonisatiepatronen en soort- en diversiteitsafhankelijke invloed op afbraakprocessen = Nematodes associated with phytodetritus in salt marshes: colonization patterns and species- and diversity related impacts on decomposition processes. pp. 10-29 Gomez-Gil, B.; Thompson, F.L.; Thompson, C.C.; Swings, J. (2003). Vibrio rotiferianus sp. nov., isolated from cultures of the rotifer Brachionus plicatilis, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 183-189 Gomez-Gil, B.; Thompson, F.L.; Thompson, C.C.; Garcia-Gasca, A.; Roque, A.; Swings, J. (2003). Vibrio hispanicus sp nov., isolated from Artemia sp. and seawater in Spain, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 165-172 Gomez-Gil, B.; Thompson, F.L.; Thompson, C.C.; Swings, J. (2003). Vibrio pacinii sp. nov., a new species isolated from cultured aquatic organisms, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 173-181 Gomez-Gil, B.; Thompson, F.L.; Swings, J. (2003). Molecular identification of V. campbellii and V. harveyi isolates associated with disease in aquatic organisms, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 87-92 Hayashi, K.; Moriwaki, J.; Sawabe, T.; Thompson, F.L.; Swings, J.; Gudkovs, N.; Christen, R.; Ezura, Y. (2003). Vibrio superstes sp. nov., isolated from the gut of Australian abalones Haliotis laevigata and Haliotis rubra, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 191-196 Sawabe, T.; Hayashi, K.; Moriwaki, J.; Thompson, F.L.; Swings, J.; Potin, P.; Kloareg, B.; Christen, R.; Ezura, Y. (2003). Vibrio gallicus sp nov., isolated from the gut of French abalone Haliotis tuberculata, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 159-163 Thompson, F.L.; Hoste, B.; Vandemeulebroecke, K.; Swings, J. (2003). Reclassification of V. hollisae as Grimontia hollisae gen. nov., comb. nov., in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 205-210 Thompson, F.L.; Thompson, C.C.; Swings, J. (2003). Vibrio tasmaniensis sp. nov., isolated from Atlantic salmon (Salmo salar L.), in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 197-204 Thompson, F.L.; Hoste, B.; Vandemeulebroecke, K.; Engelbeen, K.; Denis, R.; Swings, J. (2003). Vibrio trachuri Iwamoto et al. 1995 is a junior synonym of Vibrio harveyi (Johnson and Shunk 1936) Baumann et al. 1981, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 217-222 Thompson, F.L.; Thompson, C.C.; Hoste, B.; Vandemeulebroecke, K.; Gullian, M.; Swings, J. (2003). Vibrio fortis sp. nov. and Vibrio hepatarius sp. nov., isolated from aquatic animals and the marine environment, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 147-158 Thompson, F.L.; Thompson, C.C.; Li, Y.; Gomez-Gil, B.; Vandenberghe, J.; Hoste, B.; Swings, J. (2003). Vibrio kanaloae sp. nov., Vibrio pomeroyi sp. nov. and Vibrio chagasii sp. nov., from sea water and marine animals, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 123-134 Vandenberghe, J.; Thompson, F.L.; Gomez-Gil, B.; Swings, J. (2003). Phenotypic diversity amongst Vibrio isolates from marine aquaculture systems, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 39-50 Sawabe, T.; Thompson, F.L.; Heyrman, J.; Cnockaert, M.; Hayashi, K.; Tanaka, R.; Yoshimizu, M.; Hoste, B.; Swings, J.; Ezura, Y. (2002). Fluorescent amplified fragment length polymorphism and repetitive extragenic palindrome-PCR fingerprinting reveal host-specific genetic diversity of Vibrio halioticoli-like strains isolated from the gut of Japanese abalone, in: Thompson, F.L. (2003). Improved taxonomy of the family Vibrionaceae. pp. 69-76 Thompson, F.L.; Hoste, B.; Thompson, C.C.; Goris, J.; Gomez-Gil, B.; Huys, L.; de Vos, P.; Swings, J. (2002). Enterovibrio norvegicus gen. nov., sp. nov., isolated from the gut of turbot (Scophthalmus maximus) larvae: a new member of the family Vibrionaceae, in: Thompson, F.L. (2003). Improved taxonomy of the family Vibrionaceae. pp. 95-107 Thompson, F.L.; Hoste, B.; Vandemeulebroecke, K.; Swings, J. (2001). Genomic diversity amongst Vibrio isolates from different sources determined by fluorescent amplified fragment length polymorphism, in: Thompson, F.L. (2003). Improved taxonomy of the family Vibrionaceae. pp. 51-65 Thompson, F.L.; Hoste, B.; Thompson, C.C.; Huys, G.; Swings, J. (2001). The coral bleaching Vibrio shiloi Kushmaro et al. 2001 is a later synonym of Vibrio mediterranei Pujalte and Garay 1986, in: Thompson, F.L. (2003). Improved taxonomy of the family Vibrionaceae. pp. 211-216 Vandenberghe, J.; Thompson, F.L.; Swings, J. (2001). Phenotypic diversity amongst Vibrio isolates from marine aquaculture, in: Hendry, C.I. et al. (Ed.) Larvi 2001: 3rd fish and shellfish larviculture symposium Gent, Belgium, September 3-6, 2001. Special Publication European Aquaculture Society, 30: pp. 622-623 Shiri Harzevili, A.R.; Van Duffel, H.; Defoort, T.; Sorgeloos, P.; Swings, J. (1995). The influence of a selected bacterial strain Vibrio anguillarum TR27 on the growth rate of the rotifer, Brachionus plicatilis in two culture conditions, in: Lavens, P. et al. (Ed.) Larvi '95: Fish & Shellfish Symposium, Gent, Belgium, September 3-7, 1995. EAS Special Publication, 24: pp. 480-483 Verdonck, L.; Swings, J.; Sorgeloos, P. (1995). Characterization and possible role of the Vibrio flora involved in marine larviculture, in: Lavens, P. et al. (Ed.) Larvi '95: Fish & Shellfish Symposium, Gent, Belgium, September 3-7, 1995. EAS Special Publication, 24: pp. 492 Dehasque, M.; Verdonck, L.; Sorgeloos, P.; Swings, J.; Léger, P.; Kersters, K. (1991). Determination of the bacterial contamination in live food production systems in marine fish hatcheries in southern Europe, in: Lavens, P. et al. (Ed.) Larvi '91. Short communications and abstracts of contributions presented at the international Symposium on Fish and Crustacean Larviculture. Gent, Belgium, August 27-30, 1991. EAS Special Publication, 15: pp. 399-402 Verdonck, L.; Dehasque, M.; Swings, J.; Sorgeloos, P.; Léger, Ph. (1991). The microbial environment of rotifer (Brachionus plicatilis) and Artemia production systems, in: Lavens, P. et al. (Ed.) Larvi '91. Short communications and abstracts of contributions presented at the international Symposium on Fish and Crustacean Larviculture. Gent, Belgium, August 27-30, 1991. EAS Special Publication, 15: pp. 398
Thesis (co-)promotor [show]
Van Trappen, S. (2004). Biodiversity of bacterial isolates from Antarctic lakes and polar seas. PhD Thesis. Universiteit Gent. Faculteit Wetenschappen: Gent. 312, ill. pp.

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