Cruz-Laufer, A.J.; Pariselle, A.; Jorissen, M.W.P.; Muterezi Bukinga, F.; Al Assadi, A.; Van Steenberge, M.; Koblmüller, S.; Sturmbauer, C.; Smeets, K.; Huyse, T.; Artois, T.; Vanhove, M.P.M. (2022). Somewhere I belong: phylogeny and morphological evolution in a species-rich lineage of ectoparasitic flatworms infecting cichlid fishes. Cladistics (Print) 38(4): 465-512. https://dx.doi.org/10.1111/cla.12506
Geraerts, M.; Vangestel, C.; Artois, T.; de Oliveira Fernandes, J.M.; Jorissen, M.W.P.; Chocha Manda, A.; Danadu Mizani, C.; Smeets, K.; Snoeks, J.; Sonet, G.; Tingbao, Y.; Van Steenberge, M.; Vreven, E.; Lunkayilakio Wamuini, S.; Vanhove, M.P.M.; Huyse, T. (2022). Population genomics of introduced Nile tilapia Oreochromis niloticus (Linnaeus, 1758) in the Democratic Republic of the Congo: Repeated introductions since colonial times with multiple sources. Mol. Ecol. 31(12): 3304-3322. https://dx.doi.org/10.1111/mec.16479
Geraerts, M.; Huyse, T.; Barson, M.; Bassirou, H.; Bilong Bilong, C.F.; Bitja Nyom, A.R.; Chocha Manda, A.; Cruz-Laufer, A.J.; Kalombo Kabalika, C.; Kapepula Kasembele, G.; Muterezi Bukinga, F.; Njom, S.; Artois, T.; Vanhove, M.P.M. (2022). Mosaic or melting pot: The use of monogeneans as a biological tag and magnifying glass to discriminate introduced populations of Nile tilapia in sub-Saharan Africa. Genomics (S. Diego Calif.) 114(3): 110328. https://dx.doi.org/10.1016/j.ygeno.2022.110328
Jorissen, M.W.P.; Vanhove, M.P.M.; Pariselle, A.; Snoeks, J.; Vreven, E.; Simková, A.; Wamuini Lunkayilakio, S.; Manda, A.C.; Kapepula Kasembele, G.; Muterezi Bukinga, F.; Artois, T.; Huyse, T. (2022). Molecular footprint of parasite co-introduction with Nile tilapia in the Congo Basin. Org. Divers. Evol. 22: 1003-1019. https://dx.doi.org/10.1007/s13127-022-00563-x
Geraerts, M.; Muterezi Bukinga, F.; Vanhove, M.P.M.; Pariselle, A.; Chocha Manda, A.; Vreven, E.; Huyse, T.; Artois, T. (2020). Six new species of Cichlidogyrus Paperna, 1960 (Platyhelminthes: Monogenea) from the gills of cichlids (Teleostei: Cichliformes) from the Lomami River Basin (DRC: Middle Congo). Parasites & Vectors 13(1): 187. https://dx.doi.org/10.1186/s13071-020-3927-4
Jorissen, M.W.P.; Huyse, T.; Wamuini Lunkayilakio, S.; Muterezi Bukinga, F.; Chocha Manda, A.; Kapepula Kasembele, G.; Vreven, E.J.; Snoeks, J.; Decru, E.; Artois, T.; Vanhove, M.P.M. (2020). Historical museum collections help detect parasite species jumps after tilapia introductions in the Congo Basin. Biological Invasions 22(9): 2825-2844. https://dx.doi.org/10.1007/s10530-020-02288-4
Jorissen, M.W.P.; Pariselle, A.; Huyse, T.; Vreven, E.J.; Snoeks, J.; Decru, E.; Kusters, T.; Lunkayilakio, S.W.; Bukinga, F.M.; Artois, T.; Vanhove, M.P.M. (2018). Six new dactylogyrid species (Platyhelminthes, Monogenea) from the gills of cichlids (Teleostei, Cichliformes) from the Lower Congo Basin. Parasite 25: 64. https://dx.doi.org/10.1051/parasite/2018059
Huyse, T.; Oeyen, M.; Larmuseau, M.H.D.; Volckaert, F.A.M. (2017). Co-phylogeographic study of the flatworm Gyrodactylus gondae and its goby host Pomatoschistus minutus. Parasitol. Int. 66(2): 119-125. https://dx.doi.org/10.1016/j.parint.2016.12.008
Stoyanov, B.; Huyse, T.; Pankov, P.; Georgiev, B. (2016). Morphological and molecular identification of Gyrodactylus bubyri Osmanov, 1965 (Monogenea: Gyrodactylidae) from Caucasian dwarf goby, Knipowitschia caucasica (Berg) (Actinopterygii: Gobionellidae) from a Black Sea lagoon. Parasitol. Res. 115(4): 1617-1625. https://dx.doi.org/10.1007/s00436-015-4899-8
Vanhove, M.P.M.; Hablützel, P.I.; Pariselle, A.; Simková, A.; Huyse, T.; Raeymaekers, J.A.M. (2016). Cichlids: a host of opportunities for evolutionary parasitology. Trends Parasitol. 32(10): 820-832. https://dx.doi.org/10.1016/j.pt.2016.07.002
Vanhove, M.P.M.; Pariselle, A.; Van Steenberge, M.; Raeymaekers, J.A.M.; Hablützel, P.I.; Gillardin, C.; Hellemans, B.; Breman, F.C.; Koblmüller, S.; Sturmbauer, C.; Snoeks, J.; Volckaert, F.A.M.; Huyse, T. (2015). Hidden biodiversity in an ancient lake: phylogenetic congruence between Lake Tanganyika tropheine cichlids and their monogenean flatworm parasites. NPG Scientific Reports 5(1): 13669. https://dx.doi.org/10.1038/srep13669
Mombaerts, M.; Verreycken, H.; Volckaert, F.A.M.; Huyse, T. (2014). The invasive round goby Neogobius melanostomus and tubenose goby Proterorhinus semilunaris: two introduction routes into Belgium. Aquat. Invasions 9(3): 305-314. dx.doi.org/10.3391/ai.2014.9.3.06
Raeymaekers, J.A.M.; Hablützel, P.I.; Grégoir, A.F.; Bamps, J.; Roose, A.K.; Vanhove, M.P.M.; Van Steenberge, M.; Pariselle, A.; Huyse, T.; Snoeks, J.; Volckaert, F.A.M. (2013). Contrasting parasite communities among allopatric colour morphs of the Lake Tanganyika cichlid Tropheus. BMC Evol. Biol. 13(1): 41. https://dx.doi.org/10.1186/1471-2148-13-41
Vanhove, M.P.M.; Tessens, B.; Schoelinck, C.; Jondelius, U.; Littlewood, D.T.J.; Artois, T.; Huyse, T. (2013). Problematic barcoding in flatworms: a case-study on monogeneans and rhabdocoels (Platyhelminthes). ZooKeys 365: 355-379. https://dx.doi.org/10.3897/zookeys.365.5776
Vanhove, M.P.M.; Economou, A.N.; Zogaris, S.; Larmuseau, M.H.D.; Giakoumi, S.; Kalogianni, E.; Volckaert, F.A.M.; Huyse, T. (2012). Phylogenetics and biogeography of the Balkan ‘sand gobies’ (Teleostei: Gobiidae): vulnerable species in need of taxonomic revision. Biol. J. Linn. Soc. 105(1): 73-91. dx.doi.org/10.1111/j.1095-8312.2011.01781.x
Larmuseau, M.H.D.; Vanhove, M.P.M.; Huyse, T.; Volckaert, F.A.M.; Decorte, R. (2011). Signature of selection on the rhodopsin gene in the marine radiation of American seven-spined gobies (Gobiidae, Gobiosomatini). J. Evolution. Biol. 24(7): 1618-1625. dx.doi.org/10.1111/j.1420-9101.2011.02290.x
Raeymaekers, J.A.M.; Wegner, K.M.; Huyse, T.; Volckaert, F.A.M. (2011). Infection dynamics of the monogenean parasite Gyrodactylus gasterostei on sympatric and allopatric populations of the three-spined stickleback Gasterosteus aculeatus. Folia Parasitol. 58(1): 27-34
Vanhove, M.P.M.; Kovacic, M.; Koutsikos, N.E.; Zogaris, S.; Vardakas, L.E.; Huyse, T.; Economou, A.N. (2011). First record of a landlocked population of marine Millerigobius macrocephalus (Perciformes: Gobiidae): observations from a unique spring-fed karstic lake (Lake Vouliagmeni, Greece) and phylogenetic positioning. Zool. Anz. 250(3): 195-204. dx.doi.org/10.1016/j.jcz.2011.03.002
Curini-Galletti, M.; Webster, B.L.; Huyse, T.; Casu, M.; Schockaert, E.R.; Artois, T.J.; Littlewood, T.J. (2010). New insights on the phylogenetic relationships of the Proseriata (Platyhelminthes), with proposal of a new genus of the family Coelogynoporidae. Zootaxa 2537: 1-18
Larmuseau, M.H.D.; Huyse, T.; Vancampenhout, K.; Van Houdt, J.K.J.; Volckaert, F.A.M. (2010). High molecular diversity in the rhodopsin gene in closely related goby fishes: a role for visual pigments in adaptive speciation? Mol. Phylogenet. Evol. 55(2): 689-698. dx.doi.org/10.1016/j.ympev.2009.10.007
Huyse, T.; Buchmann, K.; Littlewood, D.T.J. (2008). The mitochondrial genome of Gyrodactylus derjavinoides (Platyhelminthes: Monogenea) - A mitogenomic approach for Gyrodactylus species and strain identification. Gene 417(1-2): 27-34. dx.doi.org/10.1016/j.gene.2008.03.008
Raeymaekers, J.A.M.; Huyse, T.; Maelfait, H.; Hellemans, B.; Volckaert, F.A.M. (2008). Community structure, population structure and topographical specialisation of Gyrodactylus (Monogenea) ectoparasites living on sympatric stickleback species. Folia Parasitol. 55(3): 187-196
Huyse, T. (2006). Response to Giraud: Population genetics puts reproductive isolation back on track. Trends Parasitol. 22(4): 152-153. dx.doi.org/10.1016/j.pt.2006.02.002
Huyse, T.; Pampoulie, C.; Audenaert, V.; Volckaert, F.A.M. (2006). First report of Gyrodactylus spp. (Platyhelminthes: Monogenea) in the western Mediterranean Sea: molecular and morphological descriptions. J. Parasitol. 92(4): 682-690. https://dx.doi.org/10.1645/GE-690R.1
Huyse, T.; Volckaert, F.A.M.J. (2005). Comparing host and parasite phylogenies: Gyrodactylus flatworms jumping from goby to goby. Syst. Biol. 54(5): 710-718. http://dx.doi.org/10.1080/10635150500221036
Huyse, T.; Malmberg, G.; Volckaert, F.A.M. (2004). Four new species of Gyrodactylus von Nordmann, 1832 (Monogenea, Gyrodactylidae) on gobiid fishes: combined DNA and morphological analyses. Syst. Parasitol. 59(2): 103-120. http://dx.doi.org/10.1023/B:SYPA.0000044427.81580.33
Huyse, T.; Malmberg, G. (2004). Molecular and morphological comparisons between Gyrodactylus ostendicus n. sp. (Monogenea: Gyrodactylidae) on Pomatoschistus microps (Kroyer) and G. harengi Malmberg, 1957 on Clupea harengus membras L. Syst. Parasitol. 58(2): 105-113. https://dx.doi.org/10.1023/B:SYPA.0000029423.68703.43
Huyse, T.; Van Houdt, J.; Volckaert, F.A.M.J. (2004). Paleoclimatic history and vicariant speciation in the "sand goby" group (Gobiidae, Teleostei). Mol. Phylogenet. Evol. 32: 324-336. https://dx.doi.org/10.1016/j.ympev.2003.11.007
Audenaert, V.; Huyse, T.; Goemans, G.; Belpaire, C.; Volckaert, F.A.M.J. (2003). Spatio-temporal dynamics of the parasitic nematode Anguillicola crassus in Flanders, Belgium. Dis. Aquat. Org. 56(3): 223-233. dx.doi.org/10.3354/dao056223
Huyse, T.; Audenaert, V.; Volckaert, F.A.M.J. (2003). Speciation and host-parasite relationships in the parasite genus Gyrodactylus (Monogenea, Platyhelminthes) infecting gobies of the genus Pomatoschistus (Gobiidae, Teleostei). Int. J. Parasitol. 33(14): 1679-1689. http://dx.doi.org/10.1016/s0020-7519(03)00253-4
Huyse, T.; Volckaert, F.A.M.J. (2002). Identification of a host-associated species complex using molecular and morphometric analyses, with the description of Gyrodactylus rugiensoides n. sp. (Gyrodactylidae, Monogenae). Int. J. Parasitol. 32(7): 907-919. https://dx.doi.org/10.1016/S0020-7519(02)00026-7
Zietara, M.S.; Huyse, T.; Lumme, J.; Volckaert, F.A.M.J. (2002). Deep divergence among subgenera of Gyrodactylus inferred from rDNA ITS region. Parasitology 124(1): 39-52. https://dx.doi.org/10.1017/S0031182001008939
Gijsel, L.; Huyse, T.; Van Hoyweghen, I. (2019). Citizen science: Hoe burgers de wetenschap uitdagen. Pelckmans Pro: Kalmthout. ISBN 978-94-6337-170-4. 158 pp.
Gijsel, L.; Huyse, T.; Van Hoyweghen, I. (2019). Vogels, vlinders, schelpen: iedereen telt mee!, in: Gijsel, L. et al.Citizen science: hoe burgers de wetenschap uitdagen. pp. 110-121
Larmuseau, M.H.D.; Huyse, T.; Vancampenhout, K.; Van Houdt, J.K.J.; Volckaert, F.A.M.J. (2009). Insights in the adaptive evolution of the rhodopsin gene in the 'sand goby' group (Teleostei, Gobiidae), in: Larmuseau, M.H.D. Sea (in)sight: from phylogeographical insights to visual local adaptation in marine gobies = (In)zicht op zee: van fylogeografische inzichten naar visuele lokale adaptatie bij mariene grondels. pp. 167-187
Vanaverbeke, J.; Courtens, W.; Deneudt, K.; Franco, M.A.; Gysels, E.S.; Hellemans, B.; Huyse, T.; Larmuseau, M.; Mees, J.; Moodley, L.; Pampoulie, C.; Provoost, P.; Remerie, T.; Soetaert, K.; Stienen, E.W.M.; Vanden Berghe, E.; Van de walle, M.; van Oevelen, D.; Volckaert, F.A.M.; Vincx, M. (2007). TROPHOS: Fundamental research for policy and sustainable management, in: Calewaert, J.-B. et al. (Ed.) Science and sustainable management of the North Sea: Belgian case studies. pp. 21-81
Huyse, T. (2002). Introduction and outline, in: Huyse, T. Evolutionary associations between Gyrodactylus and its goby host: bound forever? = Evolutionaire relaties tussen Gyrodactylus en zijn grondel gastheer: eeuwig samen?. pp. 1-14
Huyse, T.; Pampoulie, C.; Audenaert, V.; Volckaert, F.A.M.J. (2002). First report on the occurrence of Gyrodactylus (Monogenea, Platyhelminthes) in the Mediterranean Sea: morphometric and molecular investigations, in: Huyse, T. Evolutionary associations between Gyrodactylus and its goby host: bound forever? = Evolutionaire relaties tussen Gyrodactylus en zijn grondel gastheer: eeuwig samen?. pp. 83-91
Huyse, T.; Audenaert, V.; Volckaert, F.A.M.J. (2002). Towards an understanding of speciation in Gyrodactylus (Monogenea, Platyhelminthes), in: Huyse, T. Evolutionary associations between Gyrodactylus and its goby host: bound forever? = Evolutionaire relaties tussen Gyrodactylus en zijn grondel gastheer: eeuwig samen?. pp. 95-119
Huyse, T.; Malmberg, G.; Volckaert, F.A.M.J. (2002). Discrimination of four new species of Gyrodactylus (Monogenea, Platyhelminthes) parasitizing gobiid fish: combining DNA and morphological analyses, in: Huyse, T. Evolutionary associations between Gyrodactylus and its goby host: bound forever? = Evolutionaire relaties tussen Gyrodactylus en zijn grondel gastheer: eeuwig samen?. pp. 59-79
Huyse, T.; Volckaert, F.A.M.J. (2002). Tangled trees: comparing the phylogenies of Gyrodactylus and its goby host, in: Huyse, T. Evolutionary associations between Gyrodactylus and its goby host: bound forever? = Evolutionaire relaties tussen Gyrodactylus en zijn grondel gastheer: eeuwig samen?. pp. 143-159
Vincx, M.; Bonne, W.; Cattrijsse, A.; Degraer, S.; Dewicke, A.; Steyaert, M.; Vanaverbeke, J.; Van Hoey, G.; Stienen, E.; Van Waeyenberge, J.; Kuijken, E.; Meire, P.; Offringa, H.; Seys, J.; Volckaert, F.A.M.J.; Gysels, E.S.; Huyse, T.; Zietara, M.S.; Geets, A.; Hellemans, B. (2002). Structural and functional biodiversity of North Sea ecosystems: species and their habitats as indicators for a sustainable development of the Belgian Continental Shelf = De structurele en functionele biodiversiteit van de Noordzee-ecosystemen, in: Duurzaam Beheer van de Noordzee: presentatie van de onderzoeksresultaten, 21-22/01/2002. Scientific Support Plan for a Sustainable Development Policy (SPSD I): Programme "Sustainable Management of the North Sea" = Plan voor wetenschappelijke ondersteuning van een beleid gericht op duurzame ontwikkeling (PODO I): Programma "Duurzaam beheer van de Noordzee",
Zietara, M.S.; Huyse, T.; Lumme, J.; Volckaert, F.A.M.J. (2002). Deep divergence among subgenera of Gyrodactylus inferred from rDNA ITS region, in: Huyse, T. Evolutionary associations between Gyrodactylus and its goby host: bound forever? = Evolutionaire relaties tussen Gyrodactylus en zijn grondel gastheer: eeuwig samen?. pp. 15-35
Volckaert, F.A.M.J.; Huyse, T.; Geets, A. (2001). A preliminary check list of infectious eukaryotes (parasites) of fishes from the Belgian Continental Shelf, in: Cattrijsse, A. et al.Biodiversity of the benthos and the avifauna of the Belgian coastal waters: summary of data collected between 1970 and 1998. pp. 35-36
Huyse, T. (2002). Evolutionary associations between Gyrodactylus and its goby host: bound forever? = Evolutionaire relaties tussen Gyrodactylus en zijn grondel gastheer: eeuwig samen? PhD Thesis. Katholieke Universiteit Leuven (KUL): Leuven. 194 pp.
Soen, V.; Huyse, T. (Ed.) (2016). Citizen Science in Vlaanderen: U telt mee?! Jonge Academie: Brussel. ISBN 978 90 6569 159 0.
Vanaverbeke, J.; Braarup, A.B.; Braeckman, U.; Courtens, W.; Cuveliers, E.; Deneudt, K.; Goffin, A.; Hellemans, B.; Huyse, T.; Lacroix, G.; Larmuseau, M.; Mees, J.; Provoost, P.; Rabaut, M.; Remerie, T.; Savina, M.; Soetaert, K.; Stienen, E.W.M.; Verstraete, H.; Volckaert, F.; Vincx, M. (2011). Understanding benthic, pelagic and airborne ecosystem interactions in shallow coastal seas. "Westbanks": Final Report. Belgian Science Policy Office: Brussels. 82 pp.
Vanaverbeke, J.; Braeckman, U.; Cuveliers, E.L.; Courtens, W.; Huyse, T.; Lacroix, G.; Larmuseau, M.H.D.; Maes, G.E.; Provoost, P.; Rabaut, M.; Remerie, T.; Savina, M.; Soetaert, K.; Stienen, E.W.M.; Verstraete, H.; Volckaert, F.A.M.; Vincx, M. (2009). Understanding benthic, pelagic and airborne ecosystem interactions in shallow coastal seas. "Westbanks": Final Report Phase 1. Belgian Science Policy: Brussel. 46 pp.
Vanaverbeke, J.; Franco, M.A.; Remerie, T.; Vanreusel, A.; Vincx, M.; Moodley, L.; Soetaert, K.; van Oevelen, D.; Courtens, W.; Stienen, E.; Van de walle, M.; Deneudt, K.; Vanden Berghe, E.; Draisma, S.; Hellemans, B.; Huyse, T.; Volckaert, F.A.M.J.; Van den Eynde, D. (2007). Higher trophic levels in the southern North Sea “TROPHOS”: Final report EV/25. Belgian Science Policy: Brussel. 89 pp.
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