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BIOMATH (UGent)
https://biomath.ugent.be/
English name: BIOMATH
Parent institute: Universiteit Gent; Faculteit Bio-ingenieurswetenschappen; Vakgroep Data-analyse en Wiskundige Modellering (UGent), more

Address:
Coupure Links 653
9000 Gent
Belgium
 Person | Publications 
 
Type: Scientific
Person  Top | Publications 
Abstract:
BIOMATH develops and applies mathematical models and methodologies for the analysis and optimisation of bio-processes.

Research topics related to the marine field:
- Fundamental relations between spatiotemporal fish behaviour and hydraulic conditions in anthropogenically impacted streams (e.g. European eel (Anguilla anguilla) and Atlantic salmon (Salmo salar));
- Membrane modelling (in context of desalination of seawater);
- Kinetic modelling of micro-algae.
Publications (20)  Top | Person 
    ( 16 peer reviewed ) split up filter
  • Peer reviewed article Vafeiadou, A.-M.; Geldhof, K.; Barhdadi, W.; Baetens, J.M.; De Baets, B.; Moens, T.; Daly, A.J. (2024). Temperature-driven dynamics: unraveling the impact of climate change on cryptic species interactions within the Litoditis marina complex. PeerJ 12: e17324. https://dx.doi.org/10.7717/peerj.17324, more
  • Peer reviewed article Van den Bulcke, L.; De Backer, L.; Hillewaert, H.; Maes, S.; Seghers, S.; Waegeman, W.; Wittoeck, J.; Hoste, K.; Derycke, S. (2024). Comparative study of traditional and DNA-based methods for environmental impact assessment: A case study of marine aggregate extraction in the North Sea. Sci. Total Environ. 946: 174106. https://dx.doi.org/10.1016/j.scitotenv.2024.174106, more
  • Peer reviewed article Rubbens, P.; Brodie, S.; Cordier, T.; Barcellos, D.D.; Devos, P.; Fernandes-Salvador, J.A.; Fincham, J.I.; Gomes, A.; Handegard, N.O.; Howell, K.; Jamet, C.; Kartveit, K.H.; Moustahfid, H.; Parcerisas, C.; Politikos, D.; Sauzède, R.; Sokolova, M.; Uusitalo, L.; Van den Bulcke, L.; van Helmond, A.T.M.; Watson, J.T.; Welch, H.; Beltran-Perez, O.; Chaffron, S.; Greenberg, D.S.; Kühn, B.; Kiko, R.; Lo, M.; Lopes, R.M.; Möller, K.O.; Michaels, W.; Pala, A.; Romagnan, J.-B.; Schuchert, P.; Seydi, V.; Villasante, S.; Malde, K.; Irisson, J.-O. (2023). Machine learning in marine ecology: An overview of techniques and applications. ICES J. Mar. Sci./J. Cons. int. Explor. Mer 80(7): 1829-1853. https://dx.doi.org/10.1093/icesjms/fsad100, more
  • Peer reviewed article Van Putte, N.; Meire, P.; Seuntjens, P.; Joris, I.; Verreydt, G.; Hambsch, L.; Temmerman, S. (2022). Solving hindered groundwater dynamics in restored tidal marshes by creek excavation and soil amendments: a model study. Ecol. Eng. 178: 106583. https://dx.doi.org/10.1016/j.ecoleng.2022.106583, more
  • Peer reviewed article Vergeynst, J.; Pauwels, I.; Baeyens, R.; Mouton, A.; De Mulder, T.; Nopens, I. (2021). Shipping canals on the downstream migration route of European eel (Anguilla anguilla): Opportunity or bottleneck? Ecol. Freshw. Fish. 30(1): 73-87. https://dx.doi.org/10.1111/eff.12565, more
  • Peer reviewed article Bruneel, S.; Verhelst, P.; Reubens, J.; Baetens, J.M.; Coeck, J.; Moens, T.; Goethals, P. (2020). Quantifying and reducing epistemic uncertainty of passive acoustic telemetry data from longitudinal aquatic systems. Ecological Informatics 59: 101133. https://dx.doi.org/10.1016/j.ecoinf.2020.101133, more
  • Peer reviewed article Papagiannopoulou, C.; Parchen, R.; Rubbens, P.; Waegeman, W. (2020). Fast pathogen identification using single-cell matrix-assisted laser desorption/ionization-aerosol time-of-flight mass spectrometry data and deep learning methods. Anal. Chem. 92(11): 7523-7531. https://dx.doi.org/10.1021/acs.analchem.9b05806, more
  • Peer reviewed article Vergeynst, J.; Vanwyck, T.; Baeyens, R.; De Mulder, T.; Nopens, I.; Mouton, A.; Pauwels, I. (2020). Acoustic positioning in a reflective environment: going beyond point-by-point algorithms. Animal Biotelemetry 8(1): [1-17]. https://dx.doi.org/10.1186/s40317-020-00203-1, more
  • Peer reviewed article Vergeynst, J.; Baktoft, H.; Mouton, A.; De Mulder, T.; Pauwels, I. (2020). The influence of system settings on positioning accuracy in acoustic telemetry, using the YAPS algorithm. Animal Biotelemetry 8(1): 25. https://dx.doi.org/10.1186/s40317-020-00211-1, more
  • Peer reviewed article Vergeynst, J.; Pauwels, I.; Baeyens, R.; Coeck, J.; Nopens, I.; De Mulder, T.; Mouton, A. (2019). The impact of intermediate-head navigation locks on downstream fish passage. River Res. Applic. 35(3): 224-235. https://dx.doi.org/10.1002/rra.3403, more
  • Peer reviewed article Decostere, B.; Coppens, J.; Vervaeren, H.; Vlaeminck, S.E.; De Gelder, L.; Boon, N.; Nopens, I.; Van Hulle, S.W.H. (2017). Kinetic exploration of intracellular nitrate storage in marine microalgae. Journal of Environmental Science and Health Part A-Toxic/Hazardous Substances & Environmental Engineering 52(14): 1303-1311. https://dx.doi.org/10.1080/10934529.2017.1364921, more
  • Peer reviewed article Jerves-Cobo, R.; Everaert, G.; Iñiguez-Vela, X.; Córdova-Vela, G.; Díaz-Granda, C.; Cisneros, F.; Nopens, I.; Goethals, P.L.M. (2017). A methodology to model environmental preferences of EPT taxa in the Machangara river basin (Ecuador). Water 9(3): 195. https://dx.doi.org/10.3390/w9030195, more
  • Peer reviewed article Naessens, W.; Maere, T.; Gilabert-Oriol, G.; Nopens, I. (2017). PCA as tool for intelligent ultrafiltration for reverse osmosis seawater desalination pretreatment. Desalination 419: 188-196. https://dx.doi.org/10.1016/j.desal.2017.06.018, more
  • Peer reviewed article Coppens, J.; Decostere, B.; Van Hulle, S.; Nopens, I.; Vlaeminck, S.E.; De Gelder, L.; Boon, N. (2014). Kinetic exploration of nitrate-accumulating microalgae for nutrient recovery. Appl. Microbiol. Biotechnol. 98(19): 8377-8387. https://dx.doi.org/10.1007/s00253-014-5854-9, more
  • Peer reviewed article Pham, D.T.; Everaert, G.; Janssens, N.; Alvarado, A.; Nopens, I.; Goethals, P.L.M. (2014). Algal community analysis in a waste stabilisation pond. Ecol. Eng. 73: 302-306. https://dx.doi.org/10.1016/j.ecoleng.2014.09.046, more
  • Peer reviewed article De Laender, F.; De Schamphelaere, K.A.C.; Vanrolleghem, P.A.; Janssen, C.R. (2008). Is ecosystem structure the target of concern in ecological effect assessments? Wat. Res. 42(10-11): 2395-2402. https://dx.doi.org/10.1016/j.watres.2008.01.006, more
  • Delva, S.; Bafort, Q.; Bogaert, K.; Baetens, J.M.; De Baets, B.; De Clerck, O. (2022). Beyond genetics, exploring the contribution of epigenetics to thermal adaptation in brown seaweeds, in: Mees, J. et al. Book of abstracts – VLIZ Marine Science Day, Online event 2 March 2022. VLIZ Special Publication, 88: pp. 4, more
  • Rumes, B.; De Pauw, L.; Meys, J.; Debusschere, E.; Baetens, J.M. (2022). What drives harbour porpoise (Phocoena phocoena) response to pile driving sound?, in: Degraer, S. et al. Environmental impacts of offshore wind farms in the Belgian part of the North Sea: Getting ready for offshore wind farm expansion in the North Sea. Memoirs on the Marine Environment, : pp. 93-106, more
  • Belpaire, C.; Breine, J.; Van Wichelen, J.; Pauwels, I.; Baeyens, R.; Coeck, J.; Matondo, B.N.; Ovidio, M.; Vergeynst, J.; Verhelst, P.; De Meyer, J.; Adriaens, D.; Teunen, L.; Bervoets, L.; Sony, D.; Rollin, X.; Dumonceau, F.; Vlietinck, K. (2020). Report on the eel stock, fishery and other impacts in Belgium, 2019–2020. ICES Scientific Reports = Rapports Scientifiques du CIEM, 2. ICES: Copenhagen. 48 pp., more
  • Van den Bulcke, L.; De Backer, A.; Hostens, K.; Maes, S.; Waegeman, W.; Derycke, S. (2020). Implementation of DNA metabarcoding in environmental impact assessments, in: Mees, J. et al. Book of abstracts – VLIZ Marine Science Day. Oostende, Belgium, 18 March 2020. VLIZ Special Publication, 84: pp. 82, more
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